Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHD6Q8TD26 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD6Q8TD26 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 DDX43P3-201ENST00000441064 443 ntBASIC16.35■□□□□ 0.21
CHD6Q8TD26 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 TIMM8BP1-201ENST00000452384 211 ntBASIC16.35■□□□□ 0.21
CHD6Q8TD26 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 OR7E47P-204ENST00000575924 449 ntBASIC16.35■□□□□ 0.21
CHD6Q8TD26 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 AL022326.1-202ENST00000641533 845 ntBASIC16.35■□□□□ 0.21
CHD6Q8TD26 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHD6Q8TD26 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHD6Q8TD26 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 RAB43P1-201ENST00000561790 589 ntBASIC16.34■□□□□ 0.21
CHD6Q8TD26 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 AL512353.2-201ENST00000448759 1962 ntBASIC16.34■□□□□ 0.21
CHD6Q8TD26 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 AC074386.1-202ENST00000463561 864 ntBASIC16.34■□□□□ 0.21
CHD6Q8TD26 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 TMEM261P1-201ENST00000604899 340 ntBASIC16.34■□□□□ 0.21
CHD6Q8TD26 AC019129.2-201ENST00000609837 1235 ntBASIC16.34■□□□□ 0.21
CHD6Q8TD26 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHD6Q8TD26 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHD6Q8TD26 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.33■□□□□ 0.21
CHD6Q8TD26 KRT8P44-201ENST00000441609 1350 ntBASIC16.33■□□□□ 0.21
CHD6Q8TD26 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.33■□□□□ 0.21
CHD6Q8TD26 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.33■□□□□ 0.21
CHD6Q8TD26 AC119751.2-201ENST00000504529 210 ntBASIC16.33■□□□□ 0.21
CHD6Q8TD26 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.33■□□□□ 0.21
CHD6Q8TD26 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.33■□□□□ 0.21
CHD6Q8TD26 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CHD6Q8TD26 REXO1L6P-201ENST00000603433 1515 ntBASIC16.33■□□□□ 0.21
CHD6Q8TD26 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD6Q8TD26 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD6Q8TD26 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CHD6Q8TD26 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CHD6Q8TD26 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CHD6Q8TD26 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD6Q8TD26 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD6Q8TD26 AL512384.1-201ENST00000406683 331 ntBASIC16.33■□□□□ 0.2
CHD6Q8TD26 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHD6Q8TD26 AC068472.1-201ENST00000474589 881 ntBASIC16.33■□□□□ 0.2
CHD6Q8TD26 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD6Q8TD26 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.33■□□□□ 0.2
CHD6Q8TD26 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.33■□□□□ 0.2
CHD6Q8TD26 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHD6Q8TD26 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.33■□□□□ 0.2
CHD6Q8TD26 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.33■□□□□ 0.2
CHD6Q8TD26 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHD6Q8TD26 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD6Q8TD26 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms