Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 GCSHP2-201ENST00000560971 527 ntBASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 AL157888.1-201ENST00000631930 593 ntBASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 AC008764.6-201ENST00000595909 2069 ntBASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH19Q8TAB3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 DUX4L26-201ENST00000489078 1255 ntBASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 AL023973.1-201ENST00000624619 620 ntBASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
PCDH19Q8TAB3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 AP000523.1-201ENST00000398242 1049 ntBASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 AC104076.2-201ENST00000448912 469 ntBASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 AC006011.2-201ENST00000621313 1158 ntBASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH19Q8TAB3 AC093010.1-201ENST00000473625 1624 ntBASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms