Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 AC091390.4-202ENST00000476426 537 ntBASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 RPS2P4-201ENST00000476944 856 ntBASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 RARRES2P10-201ENST00000564312 460 ntBASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 AL031985.4-201ENST00000642138 673 ntBASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DNAAF1Q8NEP3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 KRT8P45-201ENST00000414328 1447 ntBASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 CD99P1-205ENST00000527459 561 ntBASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 C1QBPP2-201ENST00000528754 825 ntBASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 AC099398.1-201ENST00000567919 2776 ntBASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 AC008556.1-201ENST00000610908 2040 ntBASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DNAAF1Q8NEP3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 AC073195.1-201ENST00000607241 877 ntBASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DNAAF1Q8NEP3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms