Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC89Q8N998 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC89Q8N998 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC89Q8N998 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC89Q8N998 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC89Q8N998 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC89Q8N998 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC89Q8N998 GMCL1P1-201ENST00000463439 1581 ntBASIC18.99■□□□□ 0.63
CCDC89Q8N998 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC89Q8N998 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC89Q8N998 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC89Q8N998 RPS2P55-201ENST00000397318 883 ntBASIC18.99■□□□□ 0.63
CCDC89Q8N998 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 AL158047.1-201ENST00000445918 881 ntBASIC18.99■□□□□ 0.63
CCDC89Q8N998 AC107956.1-201ENST00000494359 873 ntBASIC18.99■□□□□ 0.63
CCDC89Q8N998 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC89Q8N998 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC89Q8N998 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC89Q8N998 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC89Q8N998 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC89Q8N998 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC89Q8N998 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC89Q8N998 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC89Q8N998 UBE2SP1-201ENST00000450587 669 ntBASIC18.98■□□□□ 0.63
CCDC89Q8N998 CA15P1-201ENST00000481698 905 ntBASIC18.98■□□□□ 0.63
CCDC89Q8N998 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC89Q8N998 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC89Q8N998 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC89Q8N998 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC89Q8N998 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC89Q8N998 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 ABHD17AP1-201ENST00000358206 933 ntBASIC18.97■□□□□ 0.63
CCDC89Q8N998 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 CRYGFP-201ENST00000418459 633 ntBASIC18.97■□□□□ 0.63
CCDC89Q8N998 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 AL096828.2-201ENST00000567259 1965 ntBASIC18.97■□□□□ 0.63
CCDC89Q8N998 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC89Q8N998 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC89Q8N998 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC89Q8N998 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC89Q8N998 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms