Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC33Q8N5R6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 AC090164.3-201ENST00000610780 2143 ntBASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 RASA4DP-201ENST00000460726 1199 ntBASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC33Q8N5R6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 HBZP1-201ENST00000354915 429 ntBASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC33Q8N5R6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 AL109659.2-201ENST00000606809 1674 ntBASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC33Q8N5R6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 AC092119.3-201ENST00000612618 583 ntBASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC33Q8N5R6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms