Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.11■□□□□ 0.81
NME8Q8N427 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.11■□□□□ 0.81
NME8Q8N427 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.11■□□□□ 0.81
NME8Q8N427 AC138894.3-201ENST00000603787 634 ntBASIC20.11■□□□□ 0.81
NME8Q8N427 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.11■□□□□ 0.81
NME8Q8N427 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.11■□□□□ 0.81
NME8Q8N427 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NME8Q8N427 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.1■□□□□ 0.81
NME8Q8N427 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.1■□□□□ 0.81
NME8Q8N427 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.1■□□□□ 0.81
NME8Q8N427 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.1■□□□□ 0.81
NME8Q8N427 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.1■□□□□ 0.81
NME8Q8N427 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NME8Q8N427 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.1■□□□□ 0.81
NME8Q8N427 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.1■□□□□ 0.81
NME8Q8N427 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.1■□□□□ 0.81
NME8Q8N427 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NME8Q8N427 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.1■□□□□ 0.81
NME8Q8N427 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NME8Q8N427 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
NME8Q8N427 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.1■□□□□ 0.81
NME8Q8N427 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.1■□□□□ 0.81
NME8Q8N427 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NME8Q8N427 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.09■□□□□ 0.81
NME8Q8N427 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
NME8Q8N427 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.09■□□□□ 0.81
NME8Q8N427 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.09■□□□□ 0.81
NME8Q8N427 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.09■□□□□ 0.81
NME8Q8N427 AL160237.2-201ENST00000556165 472 ntBASIC20.09■□□□□ 0.81
NME8Q8N427 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.09■□□□□ 0.81
NME8Q8N427 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.09■□□□□ 0.81
NME8Q8N427 AP005901.3-202ENST00000581653 237 ntBASIC20.09■□□□□ 0.81
NME8Q8N427 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.09■□□□□ 0.81
NME8Q8N427 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 AC104692.2-201ENST00000603054 253 ntBASIC20.09■□□□□ 0.81
NME8Q8N427 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.09■□□□□ 0.81
NME8Q8N427 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.09■□□□□ 0.81
NME8Q8N427 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NME8Q8N427 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NME8Q8N427 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.08■□□□□ 0.81
NME8Q8N427 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NME8Q8N427 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NME8Q8N427 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NME8Q8N427 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
NME8Q8N427 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NME8Q8N427 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NME8Q8N427 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NME8Q8N427 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.08■□□□□ 0.81
NME8Q8N427 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NME8Q8N427 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NME8Q8N427 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NME8Q8N427 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
NME8Q8N427 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NME8Q8N427 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.08■□□□□ 0.81
NME8Q8N427 MINOS1P3-201ENST00000457048 203 ntBASIC20.08■□□□□ 0.81
NME8Q8N427 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.08■□□□□ 0.81
NME8Q8N427 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NME8Q8N427 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.08■□□□□ 0.81
NME8Q8N427 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.08■□□□□ 0.81
NME8Q8N427 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
NME8Q8N427 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NME8Q8N427 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms