Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RPS2P28-201ENST00000314255 741 ntBASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 AL355877.3-201ENST00000622820 899 ntBASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPOQ8N3V7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 AC018712.1-201ENST00000455767 687 ntBASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 SCARNA2-201ENST00000458748 420 ntBASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 AC073648.2-201ENST00000510116 352 ntBASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 SLC25A1P1-201ENST00000528351 927 ntBASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPOQ8N3V7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 AC139887.3-201ENST00000568585 713 ntBASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.52■□□□□ 0.56
SYNPOQ8N3V7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.52■□□□□ 0.55
SYNPOQ8N3V7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SYNPOQ8N3V7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.52■□□□□ 0.55
SYNPOQ8N3V7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 MIR149-201ENST00000384879 89 ntBASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPOQ8N3V7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms