Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.68■□□□□ 0.58
SIX5Q8N196 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.68■□□□□ 0.58
SIX5Q8N196 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SIX5Q8N196 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SIX5Q8N196 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIX5Q8N196 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
SIX5Q8N196 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.67■□□□□ 0.58
SIX5Q8N196 LINC01521-201ENST00000504184 1943 ntBASIC18.67■□□□□ 0.58
SIX5Q8N196 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
SIX5Q8N196 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 YBX2P1-201ENST00000394192 760 ntBASIC18.67■□□□□ 0.58
SIX5Q8N196 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.67■□□□□ 0.58
SIX5Q8N196 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.67■□□□□ 0.58
SIX5Q8N196 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.67■□□□□ 0.58
SIX5Q8N196 AC005336.2-201ENST00000593183 939 ntBASIC18.67■□□□□ 0.58
SIX5Q8N196 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.67■□□□□ 0.58
SIX5Q8N196 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.67■□□□□ 0.58
SIX5Q8N196 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.67■□□□□ 0.58
SIX5Q8N196 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.67■□□□□ 0.58
SIX5Q8N196 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIX5Q8N196 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.66■□□□□ 0.58
SIX5Q8N196 AC112777.1-201ENST00000540175 1423 ntBASIC18.66■□□□□ 0.58
SIX5Q8N196 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.66■□□□□ 0.58
SIX5Q8N196 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
SIX5Q8N196 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.66■□□□□ 0.58
SIX5Q8N196 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.66■□□□□ 0.58
SIX5Q8N196 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.66■□□□□ 0.58
SIX5Q8N196 DNAJB3-201ENST00000446806 729 ntBASIC18.66■□□□□ 0.58
SIX5Q8N196 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.66■□□□□ 0.58
SIX5Q8N196 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.66■□□□□ 0.58
SIX5Q8N196 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.66■□□□□ 0.58
SIX5Q8N196 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SIX5Q8N196 Z83851.2-201ENST00000609564 659 ntBASIC18.66■□□□□ 0.58
SIX5Q8N196 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 LETM1P2-201ENST00000597330 2178 ntBASIC18.66■□□□□ 0.58
SIX5Q8N196 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SIX5Q8N196 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SIX5Q8N196 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIX5Q8N196 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.65■□□□□ 0.58
SIX5Q8N196 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SIX5Q8N196 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
SIX5Q8N196 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.65■□□□□ 0.58
SIX5Q8N196 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIX5Q8N196 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms