Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRIM48Q8IWZ4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 AC112777.1-201ENST00000540175 1423 ntBASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 NEFHP1-201ENST00000412845 2629 ntBASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM48Q8IWZ4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 AC011498.5-201ENST00000592027 486 ntBASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 AL162741.1-201ENST00000565563 1558 ntBASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM48Q8IWZ4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 AL163051.1-201ENST00000569214 1512 ntBASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM48Q8IWZ4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 KRT18P48-201ENST00000434763 852 ntBASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 BX276092.5-203ENST00000456199 560 ntBASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM48Q8IWZ4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms