Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 AL589743.5-201ENST00000616611 1050 ntBASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 LINC02199-201ENST00000506655 2702 ntBASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 AC008741.2-201ENST00000612792 3115 ntBASIC16.59■□□□□ 0.25
CROCCP3Q8IVE0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CROCCP3Q8IVE0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CROCCP3Q8IVE0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CROCCP3Q8IVE0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CROCCP3Q8IVE0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.58■□□□□ 0.25
CROCCP3Q8IVE0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.58■□□□□ 0.25
CROCCP3Q8IVE0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CROCCP3Q8IVE0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.58■□□□□ 0.25
CROCCP3Q8IVE0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CROCCP3Q8IVE0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CROCCP3Q8IVE0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 KRT18P14-201ENST00000534205 1250 ntBASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 AC110285.6-201ENST00000617652 491 ntBASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 PCDHB17P-201ENST00000539533 2393 ntBASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CROCCP3Q8IVE0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms