Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 AC007663.1-201ENST00000438948 1240 ntBASIC17.15■□□□□ 0.34
CCDC71Q8IV32 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 LINC01238-205ENST00000567549 1107 ntBASIC17.15■□□□□ 0.34
CCDC71Q8IV32 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 AL138966.2-201ENST00000621997 464 ntBASIC17.15■□□□□ 0.34
CCDC71Q8IV32 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CCDC71Q8IV32 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 HEIH-201ENST00000623091 1652 ntBASIC17.14■□□□□ 0.33
CCDC71Q8IV32 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 AL160286.2-201ENST00000567150 934 ntBASIC17.14■□□□□ 0.33
CCDC71Q8IV32 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 MTMR9LP-203ENST00000426597 1545 ntBASIC17.14■□□□□ 0.33
CCDC71Q8IV32 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 GNAS-203ENST00000306120 1878 ntBASIC17.14■□□□□ 0.33
CCDC71Q8IV32 AC009053.2-201ENST00000563701 2365 ntBASIC17.14■□□□□ 0.33
CCDC71Q8IV32 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC71Q8IV32 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 RNF152P1-201ENST00000397754 604 ntBASIC17.13■□□□□ 0.33
CCDC71Q8IV32 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 TSPY23P-201ENST00000440136 739 ntBASIC17.13■□□□□ 0.33
CCDC71Q8IV32 YBX1P2-201ENST00000489612 999 ntBASIC17.13■□□□□ 0.33
CCDC71Q8IV32 AL358472.4-201ENST00000633140 710 ntBASIC17.13■□□□□ 0.33
CCDC71Q8IV32 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC71Q8IV32 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC71Q8IV32 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms