Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 AC087388.1-201ENST00000571370 1112 ntBASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 HYMAI.1-201ENST00000620949 238 ntBASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.37■□□□□ 0.53
LYSMD3Q7Z3D4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 AL136038.4-201ENST00000603606 1261 ntBASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 AL391807.1-203ENST00000604392 2365 ntBASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYSMD3Q7Z3D4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 AL671277.2-201ENST00000458060 996 ntBASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 PCDHB18P-201ENST00000524813 2368 ntBASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYSMD3Q7Z3D4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 LINC01311-201ENST00000565162 1445 ntBASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 ESPNP-201ENST00000270691 2015 ntBASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 HBZP1-201ENST00000354915 429 ntBASIC18.34■□□□□ 0.53
LYSMD3Q7Z3D4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms