Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.48■□□□□ 0.23
LRFN4Q6PJG9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRFN4Q6PJG9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 AC073592.3-201ENST00000625118 1834 ntBASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRFN4Q6PJG9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 TNRC18P3-201ENST00000441896 2691 ntBASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 AC128688.1-201ENST00000487626 519 ntBASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 CR769767.2-201ENST00000622735 460 ntBASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 AC036111.1-201ENST00000533973 1582 ntBASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LRFN4Q6PJG9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LRFN4Q6PJG9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRFN4Q6PJG9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRFN4Q6PJG9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRFN4Q6PJG9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRFN4Q6PJG9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRFN4Q6PJG9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 WWOX-216ENST00000569818 525 ntBASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 MYC-208ENST00000641036 567 ntBASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LRFN4Q6PJG9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms