Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 AL023806.1-201ENST00000603994 1649 ntBASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEM88Q6PEY1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 AC006970.2-201ENST00000450065 779 ntBASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 AC061975.6-201ENST00000579045 1553 ntBASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 LINC00602-201ENST00000629776 2065 ntBASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 AL662844.4-201ENST00000606367 2838 ntBASIC14.79□□□□□ -0.04
TMEM88Q6PEY1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 SLC7A5P2-201ENST00000553010 536 ntBASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 RAP2CP1-201ENST00000605103 478 ntBASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TMEM88Q6PEY1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms