Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 GUSBP12-201ENST00000513727 720 ntBASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 AC012615.1-201ENST00000565797 1299 ntBASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 SDHAP2-201ENST00000455183 2001 ntBASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.89■□□□□ 0.29
H3F3CQ6NXT2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 AP000974.1-201ENST00000623909 2387 ntBASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
H3F3CQ6NXT2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 TOB2P1-201ENST00000469761 992 ntBASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 PRELID1P1-202ENST00000567272 903 ntBASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 AC005082.1-201ENST00000413042 2259 ntBASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
H3F3CQ6NXT2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3CQ6NXT2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3CQ6NXT2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
H3F3CQ6NXT2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3CQ6NXT2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3CQ6NXT2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3CQ6NXT2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3CQ6NXT2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3CQ6NXT2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
H3F3CQ6NXT2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.86■□□□□ 0.29
H3F3CQ6NXT2 LINC00265-3P-201ENST00000447588 903 ntBASIC16.86■□□□□ 0.29
H3F3CQ6NXT2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms