Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
PPP4R3AQ6IN85 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.77■□□□□ 0.91
PPP4R3AQ6IN85 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PPP4R3AQ6IN85 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PPP4R3AQ6IN85 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 AL162741.1-201ENST00000565563 1558 ntBASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PPP4R3AQ6IN85 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 KRT89P-201ENST00000620027 1478 ntBASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 ESPNP-201ENST00000270691 2015 ntBASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 MIR662-201ENST00000384847 95 ntBASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 ZNF444P1-201ENST00000559497 298 ntBASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.75■□□□□ 0.91
PPP4R3AQ6IN85 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 AC008687.5-201ENST00000593746 558 ntBASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.74■□□□□ 0.91
PPP4R3AQ6IN85 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 AL136038.3-201ENST00000561909 1096 ntBASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 AC024563.2-201ENST00000603282 481 ntBASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.73■□□□□ 0.91
PPP4R3AQ6IN85 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.72■□□□□ 0.91
PPP4R3AQ6IN85 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms