Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 AL161938.1-201ENST00000569833 2180 ntBASIC22.94■■□□□ 1.26
RC3H1Q5TC82 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RC3H1Q5TC82 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 AC093484.2-201ENST00000580996 2166 ntBASIC22.93■■□□□ 1.26
RC3H1Q5TC82 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 RPS8P6-201ENST00000426177 609 ntBASIC22.93■■□□□ 1.26
RC3H1Q5TC82 KRT18P27-201ENST00000427733 1299 ntBASIC22.93■■□□□ 1.26
RC3H1Q5TC82 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 AC002347.1-201ENST00000569543 541 ntBASIC22.93■■□□□ 1.26
RC3H1Q5TC82 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 AC079776.2-201ENST00000641154 1609 ntBASIC22.93■■□□□ 1.26
RC3H1Q5TC82 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RC3H1Q5TC82 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 MTDHP5-201ENST00000598980 586 ntBASIC22.92■■□□□ 1.26
RC3H1Q5TC82 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 AC073592.4-201ENST00000623827 446 ntBASIC22.92■■□□□ 1.26
RC3H1Q5TC82 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.92■■□□□ 1.26
RC3H1Q5TC82 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 AC007967.2-201ENST00000432613 625 ntBASIC22.91■■□□□ 1.26
RC3H1Q5TC82 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RC3H1Q5TC82 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms