Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
NKX6-1P78426 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.11■□□□□ 0.17
NKX6-1P78426 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.11■□□□□ 0.17
NKX6-1P78426 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.11■□□□□ 0.17
NKX6-1P78426 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
NKX6-1P78426 FAAHP1-202ENST00000446499 1238 ntBASIC16.11■□□□□ 0.17
NKX6-1P78426 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.11■□□□□ 0.17
NKX6-1P78426 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NKX6-1P78426 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.11■□□□□ 0.17
NKX6-1P78426 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.11■□□□□ 0.17
NKX6-1P78426 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.11■□□□□ 0.17
NKX6-1P78426 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.11■□□□□ 0.17
NKX6-1P78426 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NKX6-1P78426 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NKX6-1P78426 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.11■□□□□ 0.17
NKX6-1P78426 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
NKX6-1P78426 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NKX6-1P78426 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
NKX6-1P78426 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NKX6-1P78426 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NKX6-1P78426 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.1■□□□□ 0.17
NKX6-1P78426 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.1■□□□□ 0.17
NKX6-1P78426 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NKX6-1P78426 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
NKX6-1P78426 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.1■□□□□ 0.17
NKX6-1P78426 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 HBZP1-201ENST00000354915 429 ntBASIC16.1■□□□□ 0.17
NKX6-1P78426 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 BX276092.5-203ENST00000456199 560 ntBASIC16.1■□□□□ 0.17
NKX6-1P78426 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.1■□□□□ 0.17
NKX6-1P78426 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.1■□□□□ 0.17
NKX6-1P78426 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.1■□□□□ 0.17
NKX6-1P78426 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.1■□□□□ 0.17
NKX6-1P78426 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NKX6-1P78426 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.1■□□□□ 0.17
NKX6-1P78426 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.1■□□□□ 0.17
NKX6-1P78426 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.1■□□□□ 0.17
NKX6-1P78426 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NKX6-1P78426 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NKX6-1P78426 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
NKX6-1P78426 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
NKX6-1P78426 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NKX6-1P78426 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NKX6-1P78426 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.1■□□□□ 0.17
NKX6-1P78426 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX6-1P78426 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
NKX6-1P78426 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NKX6-1P78426 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 HEIH-201ENST00000623091 1652 ntBASIC16.09■□□□□ 0.17
NKX6-1P78426 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NKX6-1P78426 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 MIR564-202ENST00000385049 94 ntBASIC16.09■□□□□ 0.17
NKX6-1P78426 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.09■□□□□ 0.17
NKX6-1P78426 TSSC2-201ENST00000450217 709 ntBASIC16.09■□□□□ 0.17
NKX6-1P78426 AC034232.1-201ENST00000506026 1064 ntBASIC16.09■□□□□ 0.17
NKX6-1P78426 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.09■□□□□ 0.17
NKX6-1P78426 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.09■□□□□ 0.17
NKX6-1P78426 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX6-1P78426 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms