Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP46P62068 AL024508.2-201ENST00000607749 1894 ntBASIC19.2■□□□□ 0.66
USP46P62068 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP46P62068 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.2■□□□□ 0.66
USP46P62068 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP46P62068 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP46P62068 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.2■□□□□ 0.66
USP46P62068 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.2■□□□□ 0.66
USP46P62068 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP46P62068 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.2■□□□□ 0.66
USP46P62068 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
USP46P62068 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.2■□□□□ 0.66
USP46P62068 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP46P62068 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.2■□□□□ 0.66
USP46P62068 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.2■□□□□ 0.66
USP46P62068 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.2■□□□□ 0.66
USP46P62068 KRT126P-201ENST00000549467 1181 ntBASIC19.2■□□□□ 0.66
USP46P62068 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
USP46P62068 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
USP46P62068 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP46P62068 KRT89P-201ENST00000620027 1478 ntBASIC19.2■□□□□ 0.66
USP46P62068 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP46P62068 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.2■□□□□ 0.66
USP46P62068 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP46P62068 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.2■□□□□ 0.66
USP46P62068 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP46P62068 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP46P62068 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
USP46P62068 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.19■□□□□ 0.66
USP46P62068 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.19■□□□□ 0.66
USP46P62068 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.19■□□□□ 0.66
USP46P62068 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.19■□□□□ 0.66
USP46P62068 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.19■□□□□ 0.66
USP46P62068 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.19■□□□□ 0.66
USP46P62068 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.19■□□□□ 0.66
USP46P62068 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.19■□□□□ 0.66
USP46P62068 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.19■□□□□ 0.66
USP46P62068 AC004263.2-201ENST00000617183 678 ntBASIC19.19■□□□□ 0.66
USP46P62068 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.19■□□□□ 0.66
USP46P62068 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.19■□□□□ 0.66
USP46P62068 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
USP46P62068 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.19■□□□□ 0.66
USP46P62068 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP46P62068 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.19■□□□□ 0.66
USP46P62068 AL353692.3-201ENST00000407031 1396 ntBASIC19.19■□□□□ 0.66
USP46P62068 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
USP46P62068 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.18■□□□□ 0.66
USP46P62068 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.18■□□□□ 0.66
USP46P62068 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
USP46P62068 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 DRAXINP1-201ENST00000437611 948 ntBASIC19.18■□□□□ 0.66
USP46P62068 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.18■□□□□ 0.66
USP46P62068 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.18■□□□□ 0.66
USP46P62068 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.18■□□□□ 0.66
USP46P62068 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.18■□□□□ 0.66
USP46P62068 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.18■□□□□ 0.66
USP46P62068 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.18■□□□□ 0.66
USP46P62068 AC005332.8-201ENST00000622750 2735 ntBASIC19.18■□□□□ 0.66
USP46P62068 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.18■□□□□ 0.66
USP46P62068 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
USP46P62068 AC126763.1-201ENST00000552015 2118 ntBASIC19.18■□□□□ 0.66
USP46P62068 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP46P62068 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP46P62068 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP46P62068 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP46P62068 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.17■□□□□ 0.66
USP46P62068 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP46P62068 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP46P62068 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP46P62068 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP46P62068 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
USP46P62068 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms