Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB5BP61020 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5BP61020 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5BP61020 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5BP61020 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB5BP61020 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAB5BP61020 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RAB5BP61020 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5BP61020 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5BP61020 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB5BP61020 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB5BP61020 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5BP61020 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5BP61020 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5BP61020 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5BP61020 AGGF1P2-201ENST00000426656 2106 ntBASIC14.35□□□□□ -0.11
RAB5BP61020 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5BP61020 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5BP61020 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 AL603756.1-201ENST00000606511 2163 ntBASIC14.34□□□□□ -0.11
RAB5BP61020 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB5BP61020 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAB5BP61020 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB5BP61020 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAB5BP61020 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RAB5BP61020 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RAB5BP61020 MIR3181-201ENST00000578512 73 ntBASIC14.34□□□□□ -0.11
RAB5BP61020 AC010525.1-201ENST00000585559 441 ntBASIC14.34□□□□□ -0.11
RAB5BP61020 AC092028.1-203ENST00000608262 953 ntBASIC14.34□□□□□ -0.11
RAB5BP61020 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RAB5BP61020 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RAB5BP61020 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RAB5BP61020 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB5BP61020 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAB5BP61020 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB5BP61020 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5BP61020 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB5BP61020 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
RAB5BP61020 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RAB5BP61020 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB5BP61020 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.33□□□□□ -0.11
RAB5BP61020 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5BP61020 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB5BP61020 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAB5BP61020 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5BP61020 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5BP61020 YBX1P4-201ENST00000392794 808 ntBASIC14.33□□□□□ -0.12
RAB5BP61020 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB5BP61020 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5BP61020 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAB5BP61020 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5BP61020 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5BP61020 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5BP61020 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5BP61020 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5BP61020 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5BP61020 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5BP61020 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB5BP61020 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5BP61020 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5BP61020 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB5BP61020 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5BP61020 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RAB5BP61020 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5BP61020 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5BP61020 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB5BP61020 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RAB5BP61020 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5BP61020 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RAB5BP61020 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5BP61020 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5BP61020 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5BP61020 FLJ13224-201ENST00000313737 1514 ntBASIC14.32□□□□□ -0.12
RAB5BP61020 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5BP61020 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5BP61020 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5BP61020 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB5BP61020 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB5BP61020 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms