Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CDC42P60953 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDC42P60953 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC42P60953 PCDHA12-202ENST00000613593 2588 ntBASIC16.74■□□□□ 0.27
CDC42P60953 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 AP000593.1-201ENST00000393668 712 ntBASIC16.74■□□□□ 0.27
CDC42P60953 UNC93B4-201ENST00000505679 747 ntBASIC16.74■□□□□ 0.27
CDC42P60953 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC42P60953 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.74■□□□□ 0.27
CDC42P60953 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 AC099398.1-201ENST00000567919 2776 ntBASIC16.74■□□□□ 0.27
CDC42P60953 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDC42P60953 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.74■□□□□ 0.27
CDC42P60953 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.74■□□□□ 0.27
CDC42P60953 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDC42P60953 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC42P60953 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 AC108860.2-201ENST00000562760 2183 ntBASIC16.74■□□□□ 0.27
CDC42P60953 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC42P60953 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CDC42P60953 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CDC42P60953 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.73■□□□□ 0.27
CDC42P60953 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 AC083880.1-201ENST00000608266 535 ntBASIC16.73■□□□□ 0.27
CDC42P60953 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.73■□□□□ 0.27
CDC42P60953 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC42P60953 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.73■□□□□ 0.27
CDC42P60953 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDC42P60953 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC42P60953 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC42P60953 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDC42P60953 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDC42P60953 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.73■□□□□ 0.27
CDC42P60953 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42P60953 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDC42P60953 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.73■□□□□ 0.27
CDC42P60953 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC42P60953 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC42P60953 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.72■□□□□ 0.27
CDC42P60953 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDC42P60953 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42P60953 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDC42P60953 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.72■□□□□ 0.27
CDC42P60953 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42P60953 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42P60953 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42P60953 GUSBP6-202ENST00000438529 1198 ntBASIC16.72■□□□□ 0.27
CDC42P60953 TSPY6P-201ENST00000448518 926 ntBASIC16.72■□□□□ 0.27
CDC42P60953 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.72■□□□□ 0.27
CDC42P60953 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDC42P60953 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.72■□□□□ 0.27
CDC42P60953 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDC42P60953 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDC42P60953 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42P60953 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42P60953 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.72■□□□□ 0.27
CDC42P60953 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms