Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN6P56747 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN6P56747 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN6P56747 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN6P56747 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.52■□□□□ 0.4
CLDN6P56747 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN6P56747 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN6P56747 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN6P56747 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN6P56747 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.52■□□□□ 0.4
CLDN6P56747 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN6P56747 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN6P56747 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN6P56747 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN6P56747 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.39
CLDN6P56747 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN6P56747 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CLDN6P56747 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN6P56747 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CLDN6P56747 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN6P56747 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLDN6P56747 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLDN6P56747 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLDN6P56747 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDN6P56747 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 PGAM5P1-201ENST00000518923 814 ntBASIC17.51■□□□□ 0.39
CLDN6P56747 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN6P56747 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDN6P56747 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.51■□□□□ 0.39
CLDN6P56747 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDN6P56747 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CLDN6P56747 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN6P56747 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN6P56747 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLDN6P56747 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLDN6P56747 FP475955.4-201ENST00000623131 1990 ntBASIC17.5■□□□□ 0.39
CLDN6P56747 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN6P56747 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN6P56747 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.5■□□□□ 0.39
CLDN6P56747 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN6P56747 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.5■□□□□ 0.39
CLDN6P56747 AC010327.4-202ENST00000591484 748 ntBASIC17.5■□□□□ 0.39
CLDN6P56747 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.5■□□□□ 0.39
CLDN6P56747 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN6P56747 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLDN6P56747 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLDN6P56747 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLDN6P56747 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN6P56747 RPS8P6-201ENST00000426177 609 ntBASIC17.49■□□□□ 0.39
CLDN6P56747 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN6P56747 RPS2P1-201ENST00000434010 821 ntBASIC17.49■□□□□ 0.39
CLDN6P56747 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN6P56747 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 HMGN1P19-201ENST00000436976 333 ntBASIC17.49■□□□□ 0.39
CLDN6P56747 SCARNA2-201ENST00000458748 420 ntBASIC17.49■□□□□ 0.39
CLDN6P56747 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN6P56747 AL356488.2-201ENST00000602755 427 ntBASIC17.49■□□□□ 0.39
CLDN6P56747 AC140113.2-201ENST00000604370 208 ntBASIC17.49■□□□□ 0.39
CLDN6P56747 AL139424.1-201ENST00000607572 797 ntBASIC17.49■□□□□ 0.39
CLDN6P56747 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CLDN6P56747 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN6P56747 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
CLDN6P56747 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN6P56747 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms