Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.91■□□□□ 0.3
PER3P56645 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PER3P56645 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 RASA4DP-201ENST00000460726 1199 ntBASIC16.91■□□□□ 0.3
PER3P56645 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.91■□□□□ 0.3
PER3P56645 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.91■□□□□ 0.3
PER3P56645 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PER3P56645 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.91■□□□□ 0.3
PER3P56645 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PER3P56645 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.91■□□□□ 0.3
PER3P56645 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PER3P56645 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PER3P56645 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
PER3P56645 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.9■□□□□ 0.3
PER3P56645 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PER3P56645 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.9■□□□□ 0.3
PER3P56645 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.9■□□□□ 0.3
PER3P56645 NUS1P1-201ENST00000446295 882 ntBASIC16.9■□□□□ 0.3
PER3P56645 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.9■□□□□ 0.3
PER3P56645 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.9■□□□□ 0.3
PER3P56645 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
PER3P56645 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.9■□□□□ 0.3
PER3P56645 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.9■□□□□ 0.3
PER3P56645 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.9■□□□□ 0.3
PER3P56645 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PER3P56645 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.9■□□□□ 0.3
PER3P56645 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.9■□□□□ 0.3
PER3P56645 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PER3P56645 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.9■□□□□ 0.3
PER3P56645 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.9■□□□□ 0.3
PER3P56645 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.89■□□□□ 0.3
PER3P56645 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PER3P56645 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PER3P56645 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PER3P56645 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
PER3P56645 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 AC135050.7-201ENST00000624508 2218 ntBASIC16.89■□□□□ 0.29
PER3P56645 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.89■□□□□ 0.29
PER3P56645 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PER3P56645 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PER3P56645 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PER3P56645 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PER3P56645 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.89■□□□□ 0.29
PER3P56645 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PER3P56645 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.89■□□□□ 0.29
PER3P56645 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.89■□□□□ 0.29
PER3P56645 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.89■□□□□ 0.29
PER3P56645 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PER3P56645 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.89■□□□□ 0.29
PER3P56645 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PER3P56645 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms