Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
AIF1P55008 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
AIF1P55008 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.83■□□□□ 0.61
AIF1P55008 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.83■□□□□ 0.61
AIF1P55008 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AIF1P55008 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AIF1P55008 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.61
AIF1P55008 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
AIF1P55008 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AIF1P55008 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
AIF1P55008 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.61
AIF1P55008 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
AIF1P55008 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.83■□□□□ 0.61
AIF1P55008 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.83■□□□□ 0.6
AIF1P55008 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 SLC25A6P5-201ENST00000435663 894 ntBASIC18.83■□□□□ 0.6
AIF1P55008 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.83■□□□□ 0.6
AIF1P55008 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.83■□□□□ 0.6
AIF1P55008 AC092597.1-201ENST00000487352 616 ntBASIC18.83■□□□□ 0.6
AIF1P55008 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.83■□□□□ 0.6
AIF1P55008 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.83■□□□□ 0.6
AIF1P55008 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
AIF1P55008 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
AIF1P55008 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AIF1P55008 LINC01311-201ENST00000565162 1445 ntBASIC18.83■□□□□ 0.6
AIF1P55008 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.82■□□□□ 0.6
AIF1P55008 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
AIF1P55008 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.82■□□□□ 0.6
AIF1P55008 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.82■□□□□ 0.6
AIF1P55008 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
AIF1P55008 REXO1L9P-201ENST00000604264 2108 ntBASIC18.82■□□□□ 0.6
AIF1P55008 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.82■□□□□ 0.6
AIF1P55008 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.82■□□□□ 0.6
AIF1P55008 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.82■□□□□ 0.6
AIF1P55008 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.82■□□□□ 0.6
AIF1P55008 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
AIF1P55008 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
AIF1P55008 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
AIF1P55008 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AIF1P55008 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.82■□□□□ 0.6
AIF1P55008 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.81■□□□□ 0.6
AIF1P55008 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
AIF1P55008 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.81■□□□□ 0.6
AIF1P55008 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.81■□□□□ 0.6
AIF1P55008 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.81■□□□□ 0.6
AIF1P55008 AL671277.2-201ENST00000458060 996 ntBASIC18.81■□□□□ 0.6
AIF1P55008 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.81■□□□□ 0.6
AIF1P55008 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AIF1P55008 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
AIF1P55008 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.81■□□□□ 0.6
AIF1P55008 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.81■□□□□ 0.6
AIF1P55008 ZNF444P1-201ENST00000559497 298 ntBASIC18.81■□□□□ 0.6
AIF1P55008 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.81■□□□□ 0.6
AIF1P55008 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.81■□□□□ 0.6
AIF1P55008 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.81■□□□□ 0.6
AIF1P55008 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
AIF1P55008 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.81■□□□□ 0.6
AIF1P55008 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms