Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ITGA8P53708 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA8P53708 AC096733.2-201ENST00000609937 1394 ntBASIC18.78■□□□□ 0.6
ITGA8P53708 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA8P53708 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA8P53708 AC006116.8-202ENST00000587620 1550 ntBASIC18.77■□□□□ 0.6
ITGA8P53708 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ITGA8P53708 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA8P53708 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ITGA8P53708 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA8P53708 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.77■□□□□ 0.6
ITGA8P53708 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA8P53708 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA8P53708 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA8P53708 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ITGA8P53708 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.77■□□□□ 0.6
ITGA8P53708 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ITGA8P53708 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.77■□□□□ 0.6
ITGA8P53708 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ITGA8P53708 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ITGA8P53708 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
ITGA8P53708 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ITGA8P53708 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ITGA8P53708 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.77■□□□□ 0.59
ITGA8P53708 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.76■□□□□ 0.59
ITGA8P53708 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ITGA8P53708 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.76■□□□□ 0.59
ITGA8P53708 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.76■□□□□ 0.59
ITGA8P53708 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 FAM197Y1-201ENST00000421178 764 ntBASIC18.76■□□□□ 0.59
ITGA8P53708 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ITGA8P53708 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ITGA8P53708 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.76■□□□□ 0.59
ITGA8P53708 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.76■□□□□ 0.59
ITGA8P53708 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ITGA8P53708 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.76■□□□□ 0.59
ITGA8P53708 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.76■□□□□ 0.59
ITGA8P53708 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.76■□□□□ 0.59
ITGA8P53708 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ITGA8P53708 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.75■□□□□ 0.59
ITGA8P53708 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ITGA8P53708 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ITGA8P53708 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 AL163051.1-201ENST00000569214 1512 ntBASIC18.75■□□□□ 0.59
ITGA8P53708 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ITGA8P53708 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.75■□□□□ 0.59
ITGA8P53708 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.75■□□□□ 0.59
ITGA8P53708 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.75■□□□□ 0.59
ITGA8P53708 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.75■□□□□ 0.59
ITGA8P53708 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 MFAP1P1-201ENST00000442257 1255 ntBASIC18.75■□□□□ 0.59
ITGA8P53708 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.75■□□□□ 0.59
ITGA8P53708 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.75■□□□□ 0.59
ITGA8P53708 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.75■□□□□ 0.59
ITGA8P53708 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 PP12613-201ENST00000424958 2230 ntBASIC18.75■□□□□ 0.59
ITGA8P53708 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.75■□□□□ 0.59
ITGA8P53708 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.75■□□□□ 0.59
ITGA8P53708 AC009102.3-201ENST00000623118 1491 ntBASIC18.75■□□□□ 0.59
ITGA8P53708 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms