Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LIMK2P53671 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.45■□□□□ 0.54
LIMK2P53671 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 FAM8A6P-201ENST00000407496 1135 ntBASIC18.45■□□□□ 0.54
LIMK2P53671 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.45■□□□□ 0.54
LIMK2P53671 YBX1P2-201ENST00000489612 999 ntBASIC18.45■□□□□ 0.54
LIMK2P53671 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
LIMK2P53671 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LIMK2P53671 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.45■□□□□ 0.54
LIMK2P53671 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
LIMK2P53671 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.45■□□□□ 0.54
LIMK2P53671 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LIMK2P53671 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LIMK2P53671 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LIMK2P53671 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LIMK2P53671 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.44■□□□□ 0.54
LIMK2P53671 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LIMK2P53671 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.44■□□□□ 0.54
LIMK2P53671 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.44■□□□□ 0.54
LIMK2P53671 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LIMK2P53671 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.44■□□□□ 0.54
LIMK2P53671 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.44■□□□□ 0.54
LIMK2P53671 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.44■□□□□ 0.54
LIMK2P53671 TSPY5P-201ENST00000426936 936 ntBASIC18.44■□□□□ 0.54
LIMK2P53671 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
LIMK2P53671 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.44■□□□□ 0.54
LIMK2P53671 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.44■□□□□ 0.54
LIMK2P53671 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.44■□□□□ 0.54
LIMK2P53671 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
LIMK2P53671 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
LIMK2P53671 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
LIMK2P53671 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LIMK2P53671 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LIMK2P53671 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.44■□□□□ 0.54
LIMK2P53671 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
LIMK2P53671 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LIMK2P53671 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LIMK2P53671 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LIMK2P53671 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LIMK2P53671 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LIMK2P53671 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LIMK2P53671 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LIMK2P53671 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.43■□□□□ 0.54
LIMK2P53671 REXO1L9P-201ENST00000604264 2108 ntBASIC18.43■□□□□ 0.54
LIMK2P53671 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LIMK2P53671 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LIMK2P53671 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LIMK2P53671 AC034236.2-201ENST00000606662 1610 ntBASIC18.43■□□□□ 0.54
LIMK2P53671 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LIMK2P53671 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LIMK2P53671 SLC25A6P5-201ENST00000435663 894 ntBASIC18.43■□□□□ 0.54
LIMK2P53671 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.43■□□□□ 0.54
LIMK2P53671 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.43■□□□□ 0.54
LIMK2P53671 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.43■□□□□ 0.54
LIMK2P53671 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LIMK2P53671 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LIMK2P53671 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LIMK2P53671 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.43■□□□□ 0.54
LIMK2P53671 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.43■□□□□ 0.54
LIMK2P53671 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LIMK2P53671 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LIMK2P53671 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.43■□□□□ 0.54
LIMK2P53671 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.43■□□□□ 0.54
LIMK2P53671 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.42■□□□□ 0.54
LIMK2P53671 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.42■□□□□ 0.54
LIMK2P53671 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.42■□□□□ 0.54
LIMK2P53671 KRT8P50-201ENST00000562022 1438 ntBASIC18.42■□□□□ 0.54
LIMK2P53671 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LIMK2P53671 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
LIMK2P53671 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.42■□□□□ 0.54
LIMK2P53671 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.42■□□□□ 0.54
LIMK2P53671 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LIMK2P53671 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.42■□□□□ 0.54
LIMK2P53671 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LIMK2P53671 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.42■□□□□ 0.54
LIMK2P53671 AP003041.3-201ENST00000527151 707 ntBASIC18.42■□□□□ 0.54
LIMK2P53671 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.42■□□□□ 0.54
LIMK2P53671 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms