Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SMSP52788 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMSP52788 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.16■□□□□ 0.34
SMSP52788 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.16■□□□□ 0.34
SMSP52788 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMSP52788 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMSP52788 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMSP52788 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.15■□□□□ 0.34
SMSP52788 AC126763.1-201ENST00000552015 2118 ntBASIC17.15■□□□□ 0.34
SMSP52788 OR6D1P-202ENST00000641007 5290 ntBASIC17.15■□□□□ 0.34
SMSP52788 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SMSP52788 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMSP52788 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.15■□□□□ 0.34
SMSP52788 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.15■□□□□ 0.34
SMSP52788 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.15■□□□□ 0.34
SMSP52788 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.15■□□□□ 0.34
SMSP52788 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 AP000523.1-201ENST00000398242 1049 ntBASIC17.15■□□□□ 0.34
SMSP52788 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.15■□□□□ 0.34
SMSP52788 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.15■□□□□ 0.34
SMSP52788 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.15■□□□□ 0.34
SMSP52788 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.15■□□□□ 0.34
SMSP52788 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.15■□□□□ 0.34
SMSP52788 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.15■□□□□ 0.34
SMSP52788 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.15■□□□□ 0.34
SMSP52788 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SMSP52788 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.15■□□□□ 0.34
SMSP52788 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.15■□□□□ 0.34
SMSP52788 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 AC106820.2-201ENST00000563775 3264 ntBASIC17.15■□□□□ 0.34
SMSP52788 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SMSP52788 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.15■□□□□ 0.34
SMSP52788 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SMSP52788 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.15■□□□□ 0.34
SMSP52788 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMSP52788 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.14■□□□□ 0.34
SMSP52788 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SMSP52788 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SMSP52788 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.14■□□□□ 0.34
SMSP52788 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.14■□□□□ 0.33
SMSP52788 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMSP52788 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SMSP52788 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SMSP52788 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.14■□□□□ 0.33
SMSP52788 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
SMSP52788 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 AL671277.2-201ENST00000458060 996 ntBASIC17.14■□□□□ 0.33
SMSP52788 AL160286.2-201ENST00000567150 934 ntBASIC17.14■□□□□ 0.33
SMSP52788 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SMSP52788 AC093458.2-201ENST00000623150 629 ntBASIC17.14■□□□□ 0.33
SMSP52788 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.14■□□□□ 0.33
SMSP52788 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMSP52788 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SMSP52788 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SMSP52788 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.13■□□□□ 0.33
SMSP52788 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SMSP52788 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.13■□□□□ 0.33
SMSP52788 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.13■□□□□ 0.33
SMSP52788 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.13■□□□□ 0.33
SMSP52788 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.13■□□□□ 0.33
SMSP52788 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.13■□□□□ 0.33
SMSP52788 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMSP52788 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.13■□□□□ 0.33
SMSP52788 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms