Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC099343.3-201ENST00000605834 2503 ntBASIC19.2■□□□□ 0.66
CLCN4P51793 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN4P51793 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN4P51793 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCN4P51793 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
CLCN4P51793 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLCN4P51793 SDHAP2-201ENST00000455183 2001 ntBASIC19.19■□□□□ 0.66
CLCN4P51793 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.19■□□□□ 0.66
CLCN4P51793 FGFR3P6-201ENST00000457012 610 ntBASIC19.19■□□□□ 0.66
CLCN4P51793 RNPS1P1-201ENST00000507437 918 ntBASIC19.19■□□□□ 0.66
CLCN4P51793 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCN4P51793 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.19■□□□□ 0.66
CLCN4P51793 KRT18P58-201ENST00000527480 1120 ntBASIC19.19■□□□□ 0.66
CLCN4P51793 AC106730.1-201ENST00000566722 1090 ntBASIC19.19■□□□□ 0.66
CLCN4P51793 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.19■□□□□ 0.66
CLCN4P51793 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.19■□□□□ 0.66
CLCN4P51793 MIR7706-201ENST00000613747 67 ntBASIC19.19■□□□□ 0.66
CLCN4P51793 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLCN4P51793 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCN4P51793 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.19■□□□□ 0.66
CLCN4P51793 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 AL161938.1-201ENST00000569833 2180 ntBASIC19.19■□□□□ 0.66
CLCN4P51793 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCN4P51793 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCN4P51793 AL024508.2-201ENST00000607749 1894 ntBASIC19.18■□□□□ 0.66
CLCN4P51793 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCN4P51793 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLCN4P51793 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLCN4P51793 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CLCN4P51793 KRT18P13-201ENST00000400056 1290 ntBASIC19.18■□□□□ 0.66
CLCN4P51793 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.18■□□□□ 0.66
CLCN4P51793 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.18■□□□□ 0.66
CLCN4P51793 RBM17P3-201ENST00000417687 1192 ntBASIC19.18■□□□□ 0.66
CLCN4P51793 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCN4P51793 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLCN4P51793 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.18■□□□□ 0.66
CLCN4P51793 AL049840.3-201ENST00000602669 611 ntBASIC19.18■□□□□ 0.66
CLCN4P51793 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.18■□□□□ 0.66
CLCN4P51793 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLCN4P51793 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCN4P51793 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN4P51793 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLCN4P51793 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.17■□□□□ 0.66
CLCN4P51793 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLCN4P51793 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLCN4P51793 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CLCN4P51793 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLCN4P51793 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CLCN4P51793 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.17■□□□□ 0.66
CLCN4P51793 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCN4P51793 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
CLCN4P51793 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.17■□□□□ 0.66
CLCN4P51793 AC073648.2-201ENST00000510116 352 ntBASIC19.17■□□□□ 0.66
CLCN4P51793 AC009533.2-201ENST00000543664 586 ntBASIC19.17■□□□□ 0.66
CLCN4P51793 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCN4P51793 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.17■□□□□ 0.66
CLCN4P51793 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLCN4P51793 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLCN4P51793 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLCN4P51793 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN4P51793 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms