Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SMARCA4P51532 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SMARCA4P51532 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SMARCA4P51532 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SMARCA4P51532 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC32.56■■■□□ 2.8
SMARCA4P51532 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC32.56■■■□□ 2.8
SMARCA4P51532 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC32.56■■■□□ 2.8
SMARCA4P51532 AC254562.1-201ENST00000417586 456 ntBASIC32.56■■■□□ 2.8
SMARCA4P51532 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC32.56■■■□□ 2.8
SMARCA4P51532 AC027612.4-201ENST00000605371 583 ntBASIC32.56■■■□□ 2.8
SMARCA4P51532 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
SMARCA4P51532 AL022326.1-202ENST00000641533 845 ntBASIC32.56■■■□□ 2.8
SMARCA4P51532 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC32.56■■■□□ 2.8
SMARCA4P51532 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
SMARCA4P51532 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SMARCA4P51532 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
SMARCA4P51532 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC32.55■■■□□ 2.8
SMARCA4P51532 AD001527.2-201ENST00000622994 785 ntBASIC32.55■■■□□ 2.8
SMARCA4P51532 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC32.55■■■□□ 2.8
SMARCA4P51532 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC32.55■■■□□ 2.8
SMARCA4P51532 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC32.55■■■□□ 2.8
SMARCA4P51532 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SMARCA4P51532 AL161938.1-201ENST00000569833 2180 ntBASIC32.55■■■□□ 2.8
SMARCA4P51532 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SMARCA4P51532 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC32.55■■■□□ 2.8
SMARCA4P51532 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
SMARCA4P51532 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC32.55■■■□□ 2.8
SMARCA4P51532 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SMARCA4P51532 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SMARCA4P51532 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC32.55■■■□□ 2.8
SMARCA4P51532 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC32.55■■■□□ 2.8
SMARCA4P51532 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC32.55■■■□□ 2.8
SMARCA4P51532 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCA4P51532 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCA4P51532 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCA4P51532 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCA4P51532 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCA4P51532 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCA4P51532 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC32.54■■■□□ 2.8
SMARCA4P51532 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCA4P51532 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCA4P51532 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCA4P51532 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCA4P51532 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC32.54■■■□□ 2.8
SMARCA4P51532 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC32.54■■■□□ 2.8
SMARCA4P51532 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
SMARCA4P51532 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
SMARCA4P51532 HTR5BP-201ENST00000430851 1154 ntBASIC32.53■■■□□ 2.8
SMARCA4P51532 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC32.53■■■□□ 2.8
SMARCA4P51532 CIPC-205ENST00000555437 566 ntTSL 3 BASIC32.53■■■□□ 2.8
SMARCA4P51532 MIR3197-201ENST00000582241 73 ntBASIC32.53■■■□□ 2.8
SMARCA4P51532 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC32.53■■■□□ 2.8
SMARCA4P51532 PGM5P2-202ENST00000637225 1043 ntBASIC32.53■■■□□ 2.8
SMARCA4P51532 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SMARCA4P51532 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC32.53■■■□□ 2.8
SMARCA4P51532 AL032819.2-201ENST00000624543 2162 ntBASIC32.53■■■□□ 2.8
SMARCA4P51532 AC010460.3-201ENST00000511359 1579 ntBASIC32.53■■■□□ 2.8
SMARCA4P51532 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SMARCA4P51532 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SMARCA4P51532 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC32.52■■■□□ 2.8
SMARCA4P51532 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC32.52■■■□□ 2.8
SMARCA4P51532 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC32.52■■■□□ 2.8
SMARCA4P51532 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
SMARCA4P51532 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC32.52■■■□□ 2.8
SMARCA4P51532 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC32.52■■■□□ 2.8
SMARCA4P51532 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC32.52■■■□□ 2.8
SMARCA4P51532 CFL1-202ENST00000524553 860 ntTSL 2 BASIC32.52■■■□□ 2.8
SMARCA4P51532 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC32.52■■■□□ 2.8
SMARCA4P51532 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC32.52■■■□□ 2.8
SMARCA4P51532 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC32.52■■■□□ 2.8
SMARCA4P51532 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC32.52■■■□□ 2.8
SMARCA4P51532 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SMARCA4P51532 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
SMARCA4P51532 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC32.52■■■□□ 2.8
SMARCA4P51532 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC32.51■■■□□ 2.8
SMARCA4P51532 AC108073.2-201ENST00000464002 357 ntBASIC32.51■■■□□ 2.8
SMARCA4P51532 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
SMARCA4P51532 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC32.51■■■□□ 2.8
SMARCA4P51532 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC32.51■■■□□ 2.8
SMARCA4P51532 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
SMARCA4P51532 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.8
SMARCA4P51532 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC32.51■■■□□ 2.8
SMARCA4P51532 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC32.51■■■□□ 2.8
SMARCA4P51532 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC32.51■■■□□ 2.8
SMARCA4P51532 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SMARCA4P51532 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC32.51■■■□□ 2.79
SMARCA4P51532 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SMARCA4P51532 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC32.51■■■□□ 2.79
SMARCA4P51532 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC32.51■■■□□ 2.79
SMARCA4P51532 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC32.51■■■□□ 2.79
SMARCA4P51532 AL596442.2-201ENST00000610240 980 ntBASIC32.51■■■□□ 2.79
SMARCA4P51532 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SMARCA4P51532 KRT18P28-201ENST00000453838 1332 ntBASIC32.5■■■□□ 2.79
SMARCA4P51532 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC32.5■■■□□ 2.79
SMARCA4P51532 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC32.5■■■□□ 2.79
SMARCA4P51532 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC32.5■■■□□ 2.79
SMARCA4P51532 KRT8P47-201ENST00000604727 1398 ntBASIC32.5■■■□□ 2.79
SMARCA4P51532 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SMARCA4P51532 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC32.5■■■□□ 2.79
SMARCA4P51532 SPDYE21P-201ENST00000413323 827 ntBASIC32.5■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms