Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSEN1P49768 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSEN1P49768 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSEN1P49768 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC19.42■□□□□ 0.7
PSEN1P49768 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.42■□□□□ 0.7
PSEN1P49768 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.42■□□□□ 0.7
PSEN1P49768 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.42■□□□□ 0.7
PSEN1P49768 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.42■□□□□ 0.7
PSEN1P49768 AC010240.3-201ENST00000607688 395 ntBASIC19.42■□□□□ 0.7
PSEN1P49768 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.42■□□□□ 0.7
PSEN1P49768 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.42■□□□□ 0.7
PSEN1P49768 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PSEN1P49768 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PSEN1P49768 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.42■□□□□ 0.7
PSEN1P49768 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSEN1P49768 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.42■□□□□ 0.7
PSEN1P49768 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PSEN1P49768 AC093503.3-201ENST00000624917 2352 ntBASIC19.42■□□□□ 0.7
PSEN1P49768 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PSEN1P49768 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.42■□□□□ 0.7
PSEN1P49768 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.42■□□□□ 0.7
PSEN1P49768 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PSEN1P49768 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.42■□□□□ 0.7
PSEN1P49768 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSEN1P49768 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSEN1P49768 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.41■□□□□ 0.7
PSEN1P49768 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSEN1P49768 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
PSEN1P49768 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSEN1P49768 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.41■□□□□ 0.7
PSEN1P49768 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSEN1P49768 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
PSEN1P49768 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSEN1P49768 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.41■□□□□ 0.7
PSEN1P49768 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.41■□□□□ 0.7
PSEN1P49768 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.41■□□□□ 0.7
PSEN1P49768 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PSEN1P49768 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.41■□□□□ 0.7
PSEN1P49768 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSEN1P49768 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSEN1P49768 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PSEN1P49768 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSEN1P49768 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PSEN1P49768 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PSEN1P49768 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.41■□□□□ 0.7
PSEN1P49768 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.4■□□□□ 0.7
PSEN1P49768 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PSEN1P49768 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.4■□□□□ 0.7
PSEN1P49768 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PSEN1P49768 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PSEN1P49768 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.4■□□□□ 0.7
PSEN1P49768 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.4■□□□□ 0.7
PSEN1P49768 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.4■□□□□ 0.7
PSEN1P49768 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.4■□□□□ 0.7
PSEN1P49768 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.4■□□□□ 0.7
PSEN1P49768 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
PSEN1P49768 OR13I1P-201ENST00000609811 1264 ntBASIC19.4■□□□□ 0.7
PSEN1P49768 HYMAI.1-201ENST00000620949 238 ntBASIC19.4■□□□□ 0.7
PSEN1P49768 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.4■□□□□ 0.7
PSEN1P49768 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PSEN1P49768 LINC01311-201ENST00000565162 1445 ntBASIC19.4■□□□□ 0.7
PSEN1P49768 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PSEN1P49768 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.4■□□□□ 0.7
PSEN1P49768 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.4■□□□□ 0.7
PSEN1P49768 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PSEN1P49768 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.39■□□□□ 0.7
PSEN1P49768 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.39■□□□□ 0.7
PSEN1P49768 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PSEN1P49768 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PSEN1P49768 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSEN1P49768 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PSEN1P49768 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSEN1P49768 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
PSEN1P49768 ZNF444P1-201ENST00000559497 298 ntBASIC19.39■□□□□ 0.69
PSEN1P49768 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.39■□□□□ 0.69
PSEN1P49768 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PSEN1P49768 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSEN1P49768 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSEN1P49768 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PSEN1P49768 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSEN1P49768 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PSEN1P49768 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PSEN1P49768 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSEN1P49768 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.39■□□□□ 0.69
PSEN1P49768 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.39■□□□□ 0.69
PSEN1P49768 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSEN1P49768 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSEN1P49768 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms