Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A6P48664 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A6P48664 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC1A6P48664 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC1A6P48664 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
SLC1A6P48664 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC1A6P48664 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A6P48664 AC110285.5-201ENST00000611501 352 ntBASIC18.01■□□□□ 0.47
SLC1A6P48664 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A6P48664 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC1A6P48664 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A6P48664 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A6P48664 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SLC1A6P48664 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A6P48664 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC1A6P48664 AC099343.3-201ENST00000605834 2503 ntBASIC18.01■□□□□ 0.47
SLC1A6P48664 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A6P48664 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SLC1A6P48664 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 AC141586.5-201ENST00000624546 2050 ntBASIC18■□□□□ 0.47
SLC1A6P48664 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18■□□□□ 0.47
SLC1A6P48664 AC133681.1-201ENST00000465482 601 ntBASIC18■□□□□ 0.47
SLC1A6P48664 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18■□□□□ 0.47
SLC1A6P48664 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18■□□□□ 0.47
SLC1A6P48664 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18■□□□□ 0.47
SLC1A6P48664 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18■□□□□ 0.47
SLC1A6P48664 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SLC1A6P48664 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SLC1A6P48664 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18■□□□□ 0.47
SLC1A6P48664 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
SLC1A6P48664 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC1A6P48664 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18■□□□□ 0.47
SLC1A6P48664 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC1A6P48664 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC1A6P48664 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SLC1A6P48664 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SLC1A6P48664 AC034236.2-201ENST00000606662 1610 ntBASIC17.99■□□□□ 0.47
SLC1A6P48664 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
SLC1A6P48664 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 FAM207BP-201ENST00000447172 505 ntBASIC17.99■□□□□ 0.47
SLC1A6P48664 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SLC1A6P48664 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC1A6P48664 AC130371.2-201ENST00000619443 611 ntBASIC17.99■□□□□ 0.47
SLC1A6P48664 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC1A6P48664 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC1A6P48664 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SLC1A6P48664 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC1A6P48664 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC1A6P48664 KRT16P1-201ENST00000399124 1418 ntBASIC17.98■□□□□ 0.47
SLC1A6P48664 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.98■□□□□ 0.47
SLC1A6P48664 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SLC1A6P48664 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SLC1A6P48664 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC1A6P48664 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC1A6P48664 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SLC1A6P48664 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC1A6P48664 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SLC1A6P48664 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SLC1A6P48664 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
SLC1A6P48664 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC1A6P48664 RNA5SP413-201ENST00000516373 109 ntBASIC17.98■□□□□ 0.47
SLC1A6P48664 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SLC1A6P48664 AL031985.4-201ENST00000642138 673 ntBASIC17.98■□□□□ 0.47
SLC1A6P48664 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC1A6P48664 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC1A6P48664 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC1A6P48664 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms