Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC1A1P43005 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.16■□□□□ 0.66
SLC1A1P43005 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.16■□□□□ 0.66
SLC1A1P43005 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.16■□□□□ 0.66
SLC1A1P43005 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC1A1P43005 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC1A1P43005 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC1A1P43005 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC1A1P43005 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC1A1P43005 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC1A1P43005 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 AC099343.3-201ENST00000605834 2503 ntBASIC19.16■□□□□ 0.66
SLC1A1P43005 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC1A1P43005 AP000997.3-201ENST00000623333 2250 ntBASIC19.16■□□□□ 0.66
SLC1A1P43005 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC1A1P43005 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A1P43005 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A1P43005 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLC1A1P43005 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A1P43005 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A1P43005 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLC1A1P43005 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A1P43005 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLC1A1P43005 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A1P43005 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A1P43005 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC1A1P43005 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.15■□□□□ 0.66
SLC1A1P43005 EGLN1P1-201ENST00000531623 762 ntBASIC19.15■□□□□ 0.66
SLC1A1P43005 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC1A1P43005 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC1A1P43005 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A1P43005 TMEM191A-211ENST00000637163 1067 ntBASIC19.15■□□□□ 0.66
SLC1A1P43005 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A1P43005 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC1A1P43005 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A1P43005 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLC1A1P43005 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC1A1P43005 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC1A1P43005 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC1A1P43005 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC1A1P43005 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLC1A1P43005 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.14■□□□□ 0.66
SLC1A1P43005 LINC01126-201ENST00000623515 1646 ntBASIC19.14■□□□□ 0.66
SLC1A1P43005 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLC1A1P43005 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.14■□□□□ 0.66
SLC1A1P43005 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A1P43005 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A1P43005 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A1P43005 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC1A1P43005 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A1P43005 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC1A1P43005 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC1A1P43005 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.14■□□□□ 0.65
SLC1A1P43005 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC1A1P43005 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SLC1A1P43005 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A1P43005 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A1P43005 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SLC1A1P43005 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A1P43005 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLC1A1P43005 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC1A1P43005 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC1A1P43005 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A1P43005 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A1P43005 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A1P43005 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SLC1A1P43005 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC1A1P43005 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SLC1A1P43005 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SLC1A1P43005 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC1A1P43005 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC1A1P43005 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC1A1P43005 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A1P43005 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A1P43005 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A1P43005 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SLC1A1P43005 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC1A1P43005 SNORA78-201ENST00000459373 127 ntBASIC19.13■□□□□ 0.65
SLC1A1P43005 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC1A1P43005 AL355075.4-201ENST00000554988 638 ntBASIC19.13■□□□□ 0.65
SLC1A1P43005 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A1P43005 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SLC1A1P43005 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A1P43005 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A1P43005 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A1P43005 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC1A1P43005 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A1P43005 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC1A1P43005 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms