Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX6P35712 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SOX6P35712 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX6P35712 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.42■□□□□ 0.22
SOX6P35712 CYP2T3P-201ENST00000601990 817 ntBASIC16.42■□□□□ 0.22
SOX6P35712 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SOX6P35712 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX6P35712 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX6P35712 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX6P35712 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.42■□□□□ 0.22
SOX6P35712 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.42■□□□□ 0.22
SOX6P35712 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SOX6P35712 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX6P35712 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX6P35712 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SOX6P35712 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.42■□□□□ 0.22
SOX6P35712 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SOX6P35712 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX6P35712 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SOX6P35712 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX6P35712 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SOX6P35712 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX6P35712 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.41■□□□□ 0.22
SOX6P35712 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX6P35712 AC026185.1-201ENST00000445748 174 ntBASIC16.41■□□□□ 0.22
SOX6P35712 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SOX6P35712 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.41■□□□□ 0.22
SOX6P35712 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.41■□□□□ 0.22
SOX6P35712 AL589743.5-201ENST00000616611 1050 ntBASIC16.41■□□□□ 0.22
SOX6P35712 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.41■□□□□ 0.22
SOX6P35712 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SOX6P35712 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX6P35712 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SOX6P35712 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX6P35712 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX6P35712 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX6P35712 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SOX6P35712 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.41■□□□□ 0.22
SOX6P35712 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.41■□□□□ 0.22
SOX6P35712 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SOX6P35712 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SOX6P35712 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SOX6P35712 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SOX6P35712 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX6P35712 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.4■□□□□ 0.22
SOX6P35712 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.4■□□□□ 0.22
SOX6P35712 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SOX6P35712 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX6P35712 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
SOX6P35712 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SOX6P35712 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SOX6P35712 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SOX6P35712 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.4■□□□□ 0.22
SOX6P35712 CNN2P6-201ENST00000439038 900 ntBASIC16.4■□□□□ 0.22
SOX6P35712 YBX1P10-201ENST00000444752 975 ntBASIC16.4■□□□□ 0.22
SOX6P35712 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SOX6P35712 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SOX6P35712 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX6P35712 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.4■□□□□ 0.22
SOX6P35712 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SOX6P35712 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX6P35712 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.4■□□□□ 0.22
SOX6P35712 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 MTMR9LP-203ENST00000426597 1545 ntBASIC16.4■□□□□ 0.22
SOX6P35712 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX6P35712 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX6P35712 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
SOX6P35712 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.39■□□□□ 0.22
SOX6P35712 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.39■□□□□ 0.22
SOX6P35712 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.39■□□□□ 0.21
SOX6P35712 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SOX6P35712 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SOX6P35712 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.39■□□□□ 0.21
SOX6P35712 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SOX6P35712 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX6P35712 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.39■□□□□ 0.21
SOX6P35712 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.39■□□□□ 0.21
SOX6P35712 CDCA4P2-201ENST00000441182 718 ntBASIC16.39■□□□□ 0.21
SOX6P35712 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SOX6P35712 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.39■□□□□ 0.21
SOX6P35712 AC008694.1-202ENST00000636953 945 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms