Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RFC4P35249 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.91■■□□□ 1.26
RFC4P35249 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
RFC4P35249 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RFC4P35249 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
RFC4P35249 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RFC4P35249 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RFC4P35249 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RFC4P35249 AP002414.3-201ENST00000589352 1468 ntBASIC22.91■■□□□ 1.26
RFC4P35249 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.9■■□□□ 1.26
RFC4P35249 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.9■■□□□ 1.26
RFC4P35249 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
RFC4P35249 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.9■■□□□ 1.26
RFC4P35249 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
RFC4P35249 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.9■■□□□ 1.26
RFC4P35249 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
RFC4P35249 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RFC4P35249 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RFC4P35249 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC22.9■■□□□ 1.26
RFC4P35249 AC007967.2-201ENST00000432613 625 ntBASIC22.9■■□□□ 1.26
RFC4P35249 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC22.9■■□□□ 1.26
RFC4P35249 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC22.9■■□□□ 1.26
RFC4P35249 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.9■■□□□ 1.26
RFC4P35249 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.9■■□□□ 1.26
RFC4P35249 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.9■■□□□ 1.26
RFC4P35249 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22.9■■□□□ 1.26
RFC4P35249 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.9■■□□□ 1.26
RFC4P35249 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.9■■□□□ 1.26
RFC4P35249 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RFC4P35249 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
RFC4P35249 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.9■■□□□ 1.26
RFC4P35249 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RFC4P35249 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RFC4P35249 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RFC4P35249 AL032819.2-201ENST00000624543 2162 ntBASIC22.9■■□□□ 1.26
RFC4P35249 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.89■■□□□ 1.26
RFC4P35249 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.89■■□□□ 1.26
RFC4P35249 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RFC4P35249 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RFC4P35249 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RFC4P35249 MYLKP1-201ENST00000509077 1580 ntBASIC22.89■■□□□ 1.26
RFC4P35249 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.89■■□□□ 1.26
RFC4P35249 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RFC4P35249 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFC4P35249 AC004832.2-201ENST00000426397 482 ntBASIC22.89■■□□□ 1.25
RFC4P35249 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RFC4P35249 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.89■■□□□ 1.25
RFC4P35249 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RFC4P35249 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.89■■□□□ 1.25
RFC4P35249 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.89■■□□□ 1.25
RFC4P35249 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.89■■□□□ 1.25
RFC4P35249 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.89■■□□□ 1.25
RFC4P35249 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.89■■□□□ 1.25
RFC4P35249 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.89■■□□□ 1.25
RFC4P35249 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFC4P35249 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.89■■□□□ 1.25
RFC4P35249 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.89■■□□□ 1.25
RFC4P35249 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFC4P35249 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.89■■□□□ 1.25
RFC4P35249 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
RFC4P35249 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFC4P35249 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFC4P35249 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RFC4P35249 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RFC4P35249 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFC4P35249 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
RFC4P35249 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.88■■□□□ 1.25
RFC4P35249 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RFC4P35249 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
RFC4P35249 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.88■■□□□ 1.25
RFC4P35249 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC22.88■■□□□ 1.25
RFC4P35249 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.88■■□□□ 1.25
RFC4P35249 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RFC4P35249 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.88■■□□□ 1.25
RFC4P35249 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.88■■□□□ 1.25
RFC4P35249 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.88■■□□□ 1.25
RFC4P35249 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFC4P35249 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.87■■□□□ 1.25
RFC4P35249 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC22.87■■□□□ 1.25
RFC4P35249 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RFC4P35249 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.87■■□□□ 1.25
RFC4P35249 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms