Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NFKB1P19838 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NFKB1P19838 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NFKB1P19838 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NFKB1P19838 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.61■□□□□ 0.57
NFKB1P19838 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
NFKB1P19838 HCG11-201ENST00000411553 5696 ntBASIC18.61■□□□□ 0.57
NFKB1P19838 AL024508.2-201ENST00000607749 1894 ntBASIC18.61■□□□□ 0.57
NFKB1P19838 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.61■□□□□ 0.57
NFKB1P19838 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NFKB1P19838 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.61■□□□□ 0.57
NFKB1P19838 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.61■□□□□ 0.57
NFKB1P19838 GCSHP2-201ENST00000560971 527 ntBASIC18.61■□□□□ 0.57
NFKB1P19838 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NFKB1P19838 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NFKB1P19838 AL157888.1-201ENST00000631930 593 ntBASIC18.61■□□□□ 0.57
NFKB1P19838 AC092865.7-201ENST00000641832 219 ntBASIC18.61■□□□□ 0.57
NFKB1P19838 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
NFKB1P19838 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKB1P19838 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NFKB1P19838 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.6■□□□□ 0.57
NFKB1P19838 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NFKB1P19838 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
NFKB1P19838 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 TERF1P1-201ENST00000311003 1181 ntBASIC18.6■□□□□ 0.57
NFKB1P19838 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 AC211429.1-201ENST00000415277 523 ntBASIC18.6■□□□□ 0.57
NFKB1P19838 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.6■□□□□ 0.57
NFKB1P19838 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NFKB1P19838 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.6■□□□□ 0.57
NFKB1P19838 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKB1P19838 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 AL133373.2-201ENST00000623187 2828 ntBASIC18.59■□□□□ 0.57
NFKB1P19838 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.59■□□□□ 0.57
NFKB1P19838 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NFKB1P19838 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.59■□□□□ 0.57
NFKB1P19838 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.59■□□□□ 0.57
NFKB1P19838 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.59■□□□□ 0.57
NFKB1P19838 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
NFKB1P19838 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.59■□□□□ 0.57
NFKB1P19838 AL137013.1-201ENST00000432946 1228 ntBASIC18.59■□□□□ 0.57
NFKB1P19838 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.59■□□□□ 0.57
NFKB1P19838 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.59■□□□□ 0.57
NFKB1P19838 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.59■□□□□ 0.57
NFKB1P19838 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.59■□□□□ 0.57
NFKB1P19838 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.59■□□□□ 0.57
NFKB1P19838 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
NFKB1P19838 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.59■□□□□ 0.57
NFKB1P19838 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.59■□□□□ 0.57
NFKB1P19838 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.59■□□□□ 0.57
NFKB1P19838 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.59■□□□□ 0.57
NFKB1P19838 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
NFKB1P19838 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.59■□□□□ 0.57
NFKB1P19838 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.59■□□□□ 0.57
NFKB1P19838 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKB1P19838 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NFKB1P19838 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.58■□□□□ 0.57
NFKB1P19838 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.58■□□□□ 0.57
NFKB1P19838 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.58■□□□□ 0.57
NFKB1P19838 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NFKB1P19838 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NFKB1P19838 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.58■□□□□ 0.57
NFKB1P19838 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NFKB1P19838 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NFKB1P19838 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NFKB1P19838 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms