Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.39■□□□□ 0.53
VCLP18206 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.39■□□□□ 0.53
VCLP18206 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.39■□□□□ 0.53
VCLP18206 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VCLP18206 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VCLP18206 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.39■□□□□ 0.53
VCLP18206 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
VCLP18206 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
VCLP18206 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VCLP18206 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCLP18206 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.39■□□□□ 0.53
VCLP18206 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.39■□□□□ 0.53
VCLP18206 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VCLP18206 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.39■□□□□ 0.53
VCLP18206 AC139887.4-201ENST00000607877 719 ntBASIC18.39■□□□□ 0.53
VCLP18206 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.39■□□□□ 0.53
VCLP18206 AC068587.9-201ENST00000641814 219 ntBASIC18.39■□□□□ 0.53
VCLP18206 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCLP18206 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCLP18206 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.39■□□□□ 0.53
VCLP18206 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCLP18206 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.39■□□□□ 0.53
VCLP18206 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VCLP18206 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.39■□□□□ 0.53
VCLP18206 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.39■□□□□ 0.53
VCLP18206 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
VCLP18206 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
VCLP18206 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
VCLP18206 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.38■□□□□ 0.53
VCLP18206 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.38■□□□□ 0.53
VCLP18206 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.38■□□□□ 0.53
VCLP18206 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.38■□□□□ 0.53
VCLP18206 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 RNF152P1-201ENST00000397754 604 ntBASIC18.38■□□□□ 0.53
VCLP18206 MIR1224-201ENST00000408193 85 ntBASIC18.38■□□□□ 0.53
VCLP18206 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.38■□□□□ 0.53
VCLP18206 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.38■□□□□ 0.53
VCLP18206 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 YBX1P2-201ENST00000489612 999 ntBASIC18.38■□□□□ 0.53
VCLP18206 AL590326.2-201ENST00000625139 305 ntBASIC18.38■□□□□ 0.53
VCLP18206 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VCLP18206 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
VCLP18206 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.38■□□□□ 0.53
VCLP18206 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
VCLP18206 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
VCLP18206 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.38■□□□□ 0.53
VCLP18206 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
VCLP18206 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VCLP18206 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
VCLP18206 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VCLP18206 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 AC117947.1-201ENST00000427448 529 ntBASIC18.37■□□□□ 0.53
VCLP18206 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.37■□□□□ 0.53
VCLP18206 AC092647.4-201ENST00000457211 535 ntBASIC18.37■□□□□ 0.53
VCLP18206 DUX4L26-201ENST00000489078 1255 ntBASIC18.37■□□□□ 0.53
VCLP18206 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.37■□□□□ 0.53
VCLP18206 AC006011.2-201ENST00000621313 1158 ntBASIC18.37■□□□□ 0.53
VCLP18206 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.37■□□□□ 0.53
VCLP18206 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VCLP18206 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
VCLP18206 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
VCLP18206 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.36■□□□□ 0.53
VCLP18206 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VCLP18206 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.36■□□□□ 0.53
VCLP18206 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.36■□□□□ 0.53
VCLP18206 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.36■□□□□ 0.53
VCLP18206 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms