Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRKCAP17252 AL391005.1-201ENST00000623953 2435 ntBASIC16.94■□□□□ 0.3
PRKCAP17252 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PRKCAP17252 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PRKCAP17252 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.93■□□□□ 0.3
PRKCAP17252 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PRKCAP17252 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.93■□□□□ 0.3
PRKCAP17252 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.93■□□□□ 0.3
PRKCAP17252 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.93■□□□□ 0.3
PRKCAP17252 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.93■□□□□ 0.3
PRKCAP17252 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.93■□□□□ 0.3
PRKCAP17252 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.93■□□□□ 0.3
PRKCAP17252 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
PRKCAP17252 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PRKCAP17252 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.93■□□□□ 0.3
PRKCAP17252 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.93■□□□□ 0.3
PRKCAP17252 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PRKCAP17252 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PRKCAP17252 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.93■□□□□ 0.3
PRKCAP17252 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRKCAP17252 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PRKCAP17252 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.92■□□□□ 0.3
PRKCAP17252 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
PRKCAP17252 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.92■□□□□ 0.3
PRKCAP17252 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PRKCAP17252 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PRKCAP17252 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.92■□□□□ 0.3
PRKCAP17252 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.92■□□□□ 0.3
PRKCAP17252 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.92■□□□□ 0.3
PRKCAP17252 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PRKCAP17252 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PRKCAP17252 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PRKCAP17252 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRKCAP17252 AC008894.3-201ENST00000624324 3103 ntBASIC16.92■□□□□ 0.3
PRKCAP17252 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.91■□□□□ 0.3
PRKCAP17252 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
PRKCAP17252 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.91■□□□□ 0.3
PRKCAP17252 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRKCAP17252 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PRKCAP17252 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 AC211429.1-201ENST00000415277 523 ntBASIC16.91■□□□□ 0.3
PRKCAP17252 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRKCAP17252 SLC25A3P1-201ENST00000443844 931 ntBASIC16.91■□□□□ 0.3
PRKCAP17252 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.91■□□□□ 0.3
PRKCAP17252 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 AL512604.3-201ENST00000569583 964 ntBASIC16.91■□□□□ 0.3
PRKCAP17252 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.91■□□□□ 0.3
PRKCAP17252 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.91■□□□□ 0.3
PRKCAP17252 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 AC034236.2-201ENST00000606662 1610 ntBASIC16.91■□□□□ 0.3
PRKCAP17252 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.91■□□□□ 0.3
PRKCAP17252 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRKCAP17252 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms