Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.31■□□□□ 0.36
NCK1P16333 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.31■□□□□ 0.36
NCK1P16333 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.31■□□□□ 0.36
NCK1P16333 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NCK1P16333 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.31■□□□□ 0.36
NCK1P16333 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.31■□□□□ 0.36
NCK1P16333 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.31■□□□□ 0.36
NCK1P16333 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.31■□□□□ 0.36
NCK1P16333 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.31■□□□□ 0.36
NCK1P16333 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.31■□□□□ 0.36
NCK1P16333 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NCK1P16333 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NCK1P16333 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.3■□□□□ 0.36
NCK1P16333 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NCK1P16333 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NCK1P16333 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.3■□□□□ 0.36
NCK1P16333 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
NCK1P16333 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.3■□□□□ 0.36
NCK1P16333 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NCK1P16333 KRT16P5-201ENST00000455284 522 ntBASIC17.3■□□□□ 0.36
NCK1P16333 KRT18P41-201ENST00000518924 1277 ntBASIC17.3■□□□□ 0.36
NCK1P16333 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.3■□□□□ 0.36
NCK1P16333 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NCK1P16333 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.3■□□□□ 0.36
NCK1P16333 AL109923.1-201ENST00000618799 583 ntBASIC17.3■□□□□ 0.36
NCK1P16333 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
NCK1P16333 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NCK1P16333 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.29■□□□□ 0.36
NCK1P16333 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NCK1P16333 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.29■□□□□ 0.36
NCK1P16333 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NCK1P16333 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.29■□□□□ 0.36
NCK1P16333 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 AC006116.8-202ENST00000587620 1550 ntBASIC17.29■□□□□ 0.36
NCK1P16333 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.29■□□□□ 0.36
NCK1P16333 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.29■□□□□ 0.36
NCK1P16333 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.29■□□□□ 0.36
NCK1P16333 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NCK1P16333 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NCK1P16333 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.29■□□□□ 0.36
NCK1P16333 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.29■□□□□ 0.36
NCK1P16333 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.29■□□□□ 0.36
NCK1P16333 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NCK1P16333 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCK1P16333 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.28■□□□□ 0.36
NCK1P16333 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.28■□□□□ 0.36
NCK1P16333 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms