Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 FAM220CP-201ENST00000395253 831 ntBASIC20.61■□□□□ 0.89
HOXC6P09630 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.61■□□□□ 0.89
HOXC6P09630 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.61■□□□□ 0.89
HOXC6P09630 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.61■□□□□ 0.89
HOXC6P09630 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.61■□□□□ 0.89
HOXC6P09630 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.61■□□□□ 0.89
HOXC6P09630 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.61■□□□□ 0.89
HOXC6P09630 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HOXC6P09630 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC6P09630 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC6P09630 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC6P09630 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC6P09630 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HOXC6P09630 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.6■□□□□ 0.89
HOXC6P09630 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC6P09630 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.6■□□□□ 0.89
HOXC6P09630 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.6■□□□□ 0.89
HOXC6P09630 ABCD1P5-201ENST00000445663 754 ntBASIC20.6■□□□□ 0.89
HOXC6P09630 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.6■□□□□ 0.89
HOXC6P09630 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC6P09630 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC6P09630 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOXC6P09630 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.6■□□□□ 0.89
HOXC6P09630 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.6■□□□□ 0.89
HOXC6P09630 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.6■□□□□ 0.89
HOXC6P09630 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.6■□□□□ 0.89
HOXC6P09630 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.59■□□□□ 0.89
HOXC6P09630 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC6P09630 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.59■□□□□ 0.89
HOXC6P09630 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC6P09630 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HOXC6P09630 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC6P09630 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC6P09630 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC6P09630 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HOXC6P09630 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC6P09630 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC6P09630 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.59■□□□□ 0.89
HOXC6P09630 MIR940-201ENST00000401276 94 ntBASIC20.59■□□□□ 0.89
HOXC6P09630 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.59■□□□□ 0.89
HOXC6P09630 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.59■□□□□ 0.89
HOXC6P09630 SART3-203ENST00000546611 1184 ntBASIC20.59■□□□□ 0.89
HOXC6P09630 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.59■□□□□ 0.89
HOXC6P09630 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC6P09630 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOXC6P09630 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HOXC6P09630 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
HOXC6P09630 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
HOXC6P09630 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC6P09630 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.58■□□□□ 0.89
HOXC6P09630 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC6P09630 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC6P09630 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC6P09630 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC6P09630 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC6P09630 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC6P09630 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXC6P09630 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.58■□□□□ 0.89
HOXC6P09630 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.58■□□□□ 0.89
HOXC6P09630 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.58■□□□□ 0.89
HOXC6P09630 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.58■□□□□ 0.89
HOXC6P09630 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HOXC6P09630 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HOXC6P09630 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HOXC6P09630 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HOXC6P09630 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXC6P09630 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HOXC6P09630 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXC6P09630 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HOXC6P09630 AC005104.2-201ENST00000427818 678 ntBASIC20.57■□□□□ 0.88
HOXC6P09630 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXC6P09630 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.57■□□□□ 0.88
HOXC6P09630 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 AC027601.4-201ENST00000611259 610 ntBASIC20.57■□□□□ 0.88
HOXC6P09630 FAM197Y3-203ENST00000618346 717 ntBASIC20.57■□□□□ 0.88
HOXC6P09630 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXC6P09630 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
HOXC6P09630 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXC6P09630 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms