Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC098934.4-201ENST00000564127 592 ntBASIC15.2■□□□□ 0.02
CTSDP07339 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 AC133041.1-202ENST00000642053 222 ntBASIC15.2■□□□□ 0.02
CTSDP07339 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.2■□□□□ 0.02
CTSDP07339 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.2■□□□□ 0.02
CTSDP07339 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CTSDP07339 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CTSDP07339 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CTSDP07339 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CTSDP07339 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CTSDP07339 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CTSDP07339 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.19■□□□□ 0.02
CTSDP07339 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.19■□□□□ 0.02
CTSDP07339 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.19■□□□□ 0.02
CTSDP07339 AC069152.1-201ENST00000438030 544 ntBASIC15.19■□□□□ 0.02
CTSDP07339 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CTSDP07339 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 AC142086.2-201ENST00000569753 217 ntBASIC15.19■□□□□ 0.02
CTSDP07339 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.19■□□□□ 0.02
CTSDP07339 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CTSDP07339 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CTSDP07339 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CTSDP07339 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
CTSDP07339 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CTSDP07339 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CTSDP07339 AC124067.4-201ENST00000519691 2379 ntBASIC15.19■□□□□ 0.02
CTSDP07339 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.19■□□□□ 0.02
CTSDP07339 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CTSDP07339 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTSDP07339 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.18■□□□□ 0.02
CTSDP07339 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.18■□□□□ 0.02
CTSDP07339 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.18■□□□□ 0.02
CTSDP07339 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CTSDP07339 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.18■□□□□ 0.02
CTSDP07339 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.18■□□□□ 0.02
CTSDP07339 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.18■□□□□ 0.02
CTSDP07339 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.18■□□□□ 0.02
CTSDP07339 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CTSDP07339 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.18■□□□□ 0.02
CTSDP07339 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.18■□□□□ 0.02
CTSDP07339 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.18■□□□□ 0.02
CTSDP07339 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.18■□□□□ 0.02
CTSDP07339 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.18■□□□□ 0.02
CTSDP07339 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.18■□□□□ 0.02
CTSDP07339 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.18■□□□□ 0.02
CTSDP07339 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CTSDP07339 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CTSDP07339 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.18■□□□□ 0.02
CTSDP07339 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CTSDP07339 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.18■□□□□ 0.02
CTSDP07339 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms