Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TNFP01375 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TNFP01375 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFP01375 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TNFP01375 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
TNFP01375 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFP01375 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TNFP01375 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFP01375 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFP01375 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFP01375 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TNFP01375 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TNFP01375 FAAHP1-202ENST00000446499 1238 ntBASIC17.83■□□□□ 0.44
TNFP01375 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFP01375 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFP01375 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.83■□□□□ 0.44
TNFP01375 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFP01375 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFP01375 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFP01375 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFP01375 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFP01375 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFP01375 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFP01375 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFP01375 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFP01375 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNFP01375 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFP01375 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.82■□□□□ 0.44
TNFP01375 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.82■□□□□ 0.44
TNFP01375 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.82■□□□□ 0.44
TNFP01375 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.82■□□□□ 0.44
TNFP01375 AP005901.3-202ENST00000581653 237 ntBASIC17.82■□□□□ 0.44
TNFP01375 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNFP01375 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFP01375 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFP01375 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFP01375 LINC01126-201ENST00000623515 1646 ntBASIC17.82■□□□□ 0.44
TNFP01375 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFP01375 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
TNFP01375 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFP01375 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TNFP01375 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TNFP01375 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 POM121L3P-201ENST00000419331 1163 ntBASIC17.81■□□□□ 0.44
TNFP01375 KRT16P4-201ENST00000453883 522 ntBASIC17.81■□□□□ 0.44
TNFP01375 AC091607.1-201ENST00000490318 1060 ntBASIC17.81■□□□□ 0.44
TNFP01375 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFP01375 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.81■□□□□ 0.44
TNFP01375 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFP01375 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFP01375 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFP01375 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.8■□□□□ 0.44
TNFP01375 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFP01375 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFP01375 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFP01375 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFP01375 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.8■□□□□ 0.44
TNFP01375 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNFP01375 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNFP01375 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.8■□□□□ 0.44
TNFP01375 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TNFP01375 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.8■□□□□ 0.44
TNFP01375 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.8■□□□□ 0.44
TNFP01375 EMBP1-201ENST00000458200 901 ntBASIC17.8■□□□□ 0.44
TNFP01375 AC068472.1-201ENST00000474589 881 ntBASIC17.8■□□□□ 0.44
TNFP01375 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.8■□□□□ 0.44
TNFP01375 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.8■□□□□ 0.44
TNFP01375 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.8■□□□□ 0.44
TNFP01375 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.8■□□□□ 0.44
TNFP01375 AL353801.3-201ENST00000609898 542 ntBASIC17.8■□□□□ 0.44
TNFP01375 AC009154.2-201ENST00000621177 724 ntBASIC17.8■□□□□ 0.44
TNFP01375 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.8■□□□□ 0.44
TNFP01375 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.8■□□□□ 0.44
TNFP01375 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TNFP01375 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.79■□□□□ 0.44
TNFP01375 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms