Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.79■□□□□ 0.92
ALDH1A1P00352 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
ALDH1A1P00352 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.79■□□□□ 0.92
ALDH1A1P00352 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A1P00352 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.79■□□□□ 0.92
ALDH1A1P00352 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.79■□□□□ 0.92
ALDH1A1P00352 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A1P00352 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A1P00352 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A1P00352 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A1P00352 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A1P00352 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 PRYP5-201ENST00000451909 266 ntBASIC20.78■□□□□ 0.92
ALDH1A1P00352 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 BX005266.1-201ENST00000473402 457 ntBASIC20.78■□□□□ 0.92
ALDH1A1P00352 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 AC106028.4-201ENST00000614509 607 ntBASIC20.78■□□□□ 0.92
ALDH1A1P00352 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ALDH1A1P00352 MTMR9LP-203ENST00000426597 1545 ntBASIC20.78■□□□□ 0.92
ALDH1A1P00352 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A1P00352 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ALDH1A1P00352 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ALDH1A1P00352 AC141586.3-201ENST00000562166 1838 ntBASIC20.77■□□□□ 0.92
ALDH1A1P00352 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A1P00352 CRYGEP-201ENST00000412192 528 ntBASIC20.77■□□□□ 0.92
ALDH1A1P00352 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.77■□□□□ 0.92
ALDH1A1P00352 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.77■□□□□ 0.92
ALDH1A1P00352 SPCS2P1-201ENST00000561636 679 ntBASIC20.77■□□□□ 0.92
ALDH1A1P00352 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.77■□□□□ 0.92
ALDH1A1P00352 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A1P00352 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.77■□□□□ 0.92
ALDH1A1P00352 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A1P00352 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A1P00352 AL024508.2-201ENST00000607749 1894 ntBASIC20.77■□□□□ 0.92
ALDH1A1P00352 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ALDH1A1P00352 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
ALDH1A1P00352 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ALDH1A1P00352 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A1P00352 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A1P00352 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A1P00352 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A1P00352 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A1P00352 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A1P00352 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A1P00352 AC073592.4-201ENST00000623827 446 ntBASIC20.76■□□□□ 0.91
ALDH1A1P00352 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A1P00352 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A1P00352 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A1P00352 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A1P00352 ELL2P1-201ENST00000413990 1906 ntBASIC20.76■□□□□ 0.91
ALDH1A1P00352 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 LINC00602-201ENST00000629776 2065 ntBASIC20.76■□□□□ 0.91
ALDH1A1P00352 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.76■□□□□ 0.91
ALDH1A1P00352 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A1P00352 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.75■□□□□ 0.91
ALDH1A1P00352 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A1P00352 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A1P00352 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.75■□□□□ 0.91
ALDH1A1P00352 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.75■□□□□ 0.91
ALDH1A1P00352 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
ALDH1A1P00352 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A1P00352 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A1P00352 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A1P00352 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A1P00352 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.75■□□□□ 0.91
ALDH1A1P00352 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A1P00352 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ALDH1A1P00352 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.75■□□□□ 0.91
ALDH1A1P00352 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.75■□□□□ 0.91
ALDH1A1P00352 AL513190.1-201ENST00000621254 727 ntBASIC20.75■□□□□ 0.91
ALDH1A1P00352 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
ALDH1A1P00352 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.75■□□□□ 0.91
ALDH1A1P00352 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.75■□□□□ 0.91
ALDH1A1P00352 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.75■□□□□ 0.91
ALDH1A1P00352 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms