Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB2O95900 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB2O95900 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB2O95900 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB2O95900 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TRUB2O95900 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB2O95900 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRUB2O95900 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB2O95900 PVRIG2P-201ENST00000435460 978 ntBASIC19.16■□□□□ 0.66
TRUB2O95900 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.16■□□□□ 0.66
TRUB2O95900 AL671277.2-201ENST00000458060 996 ntBASIC19.16■□□□□ 0.66
TRUB2O95900 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.16■□□□□ 0.66
TRUB2O95900 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.16■□□□□ 0.66
TRUB2O95900 KRT18P35-201ENST00000510488 1269 ntBASIC19.16■□□□□ 0.66
TRUB2O95900 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.16■□□□□ 0.66
TRUB2O95900 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.16■□□□□ 0.66
TRUB2O95900 AL445228.2-201ENST00000605589 952 ntBASIC19.16■□□□□ 0.66
TRUB2O95900 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.16■□□□□ 0.66
TRUB2O95900 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.16■□□□□ 0.66
TRUB2O95900 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.16■□□□□ 0.66
TRUB2O95900 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.16■□□□□ 0.66
TRUB2O95900 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TRUB2O95900 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.16■□□□□ 0.66
TRUB2O95900 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB2O95900 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRUB2O95900 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB2O95900 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.16■□□□□ 0.66
TRUB2O95900 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.16■□□□□ 0.66
TRUB2O95900 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.16■□□□□ 0.66
TRUB2O95900 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB2O95900 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.16■□□□□ 0.66
TRUB2O95900 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.16■□□□□ 0.66
TRUB2O95900 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
TRUB2O95900 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB2O95900 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.16■□□□□ 0.66
TRUB2O95900 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB2O95900 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.15■□□□□ 0.66
TRUB2O95900 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRUB2O95900 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.15■□□□□ 0.66
TRUB2O95900 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.15■□□□□ 0.66
TRUB2O95900 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRUB2O95900 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.15■□□□□ 0.66
TRUB2O95900 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 HBZP1-201ENST00000354915 429 ntBASIC19.15■□□□□ 0.66
TRUB2O95900 AL136038.4-201ENST00000603606 1261 ntBASIC19.15■□□□□ 0.66
TRUB2O95900 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 AL391807.1-203ENST00000604392 2365 ntBASIC19.15■□□□□ 0.66
TRUB2O95900 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.15■□□□□ 0.66
TRUB2O95900 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.15■□□□□ 0.66
TRUB2O95900 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRUB2O95900 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.15■□□□□ 0.66
TRUB2O95900 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB2O95900 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRUB2O95900 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.14■□□□□ 0.66
TRUB2O95900 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.14■□□□□ 0.66
TRUB2O95900 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
TRUB2O95900 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB2O95900 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.14■□□□□ 0.65
TRUB2O95900 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRUB2O95900 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB2O95900 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB2O95900 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.14■□□□□ 0.65
TRUB2O95900 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.14■□□□□ 0.65
TRUB2O95900 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TRUB2O95900 AL031133.1-201ENST00000406807 723 ntBASIC19.14■□□□□ 0.65
TRUB2O95900 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.14■□□□□ 0.65
TRUB2O95900 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.14■□□□□ 0.65
TRUB2O95900 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB2O95900 AC083849.1-201ENST00000615227 514 ntBASIC19.14■□□□□ 0.65
TRUB2O95900 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB2O95900 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRUB2O95900 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.14■□□□□ 0.65
TRUB2O95900 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB2O95900 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB2O95900 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB2O95900 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB2O95900 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRUB2O95900 LINC01311-201ENST00000565162 1445 ntBASIC19.14■□□□□ 0.65
TRUB2O95900 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB2O95900 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB2O95900 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB2O95900 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.13■□□□□ 0.65
TRUB2O95900 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.13■□□□□ 0.65
TRUB2O95900 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB2O95900 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB2O95900 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms