Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF3O95398 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 PMPCAP1-201ENST00000508114 1576 ntBASIC27.27■■□□□ 1.96
RAPGEF3O95398 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC27.27■■□□□ 1.96
RAPGEF3O95398 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 CD9-202ENST00000382515 1229 ntTSL 5 BASIC27.27■■□□□ 1.96
RAPGEF3O95398 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 TSEN15P1-201ENST00000423257 515 ntBASIC27.27■■□□□ 1.96
RAPGEF3O95398 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC27.27■■□□□ 1.96
RAPGEF3O95398 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC27.27■■□□□ 1.96
RAPGEF3O95398 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC27.27■■□□□ 1.96
RAPGEF3O95398 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC27.27■■□□□ 1.96
RAPGEF3O95398 MAL2-202ENST00000531508 892 ntTSL 3 BASIC27.27■■□□□ 1.96
RAPGEF3O95398 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 RPL28-205ENST00000558131 444 ntTSL 5 BASIC27.27■■□□□ 1.96
RAPGEF3O95398 GREM1-201ENST00000560677 623 ntTSL 4 BASIC27.27■■□□□ 1.96
RAPGEF3O95398 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
RAPGEF3O95398 AC093512.1-201ENST00000617969 520 ntBASIC27.27■■□□□ 1.96
RAPGEF3O95398 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
RAPGEF3O95398 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RAPGEF3O95398 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC27.26■■□□□ 1.96
RAPGEF3O95398 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF3O95398 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF3O95398 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC27.26■■□□□ 1.95
RAPGEF3O95398 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF3O95398 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC27.26■■□□□ 1.95
RAPGEF3O95398 CRYGEP-201ENST00000412192 528 ntBASIC27.26■■□□□ 1.95
RAPGEF3O95398 HCG4B-203ENST00000450128 991 ntBASIC27.26■■□□□ 1.95
RAPGEF3O95398 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
RAPGEF3O95398 AC138761.1-201ENST00000584393 385 ntBASIC27.26■■□□□ 1.95
RAPGEF3O95398 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF3O95398 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC27.26■■□□□ 1.95
RAPGEF3O95398 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC27.26■■□□□ 1.95
RAPGEF3O95398 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
RAPGEF3O95398 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC27.26■■□□□ 1.95
RAPGEF3O95398 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF3O95398 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF3O95398 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF3O95398 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF3O95398 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RAPGEF3O95398 AC141586.3-201ENST00000562166 1838 ntBASIC27.25■■□□□ 1.95
RAPGEF3O95398 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF3O95398 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF3O95398 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF3O95398 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF3O95398 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC27.25■■□□□ 1.95
RAPGEF3O95398 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC27.25■■□□□ 1.95
RAPGEF3O95398 RNF34-208ENST00000555076 593 ntTSL 3 BASIC27.25■■□□□ 1.95
RAPGEF3O95398 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC27.25■■□□□ 1.95
RAPGEF3O95398 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC27.25■■□□□ 1.95
RAPGEF3O95398 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF3O95398 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF3O95398 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF3O95398 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RAPGEF3O95398 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC27.24■■□□□ 1.95
RAPGEF3O95398 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
RAPGEF3O95398 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
RAPGEF3O95398 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
RAPGEF3O95398 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF3O95398 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF3O95398 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF3O95398 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC27.24■■□□□ 1.95
RAPGEF3O95398 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF3O95398 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF3O95398 CD99-202ENST00000381180 530 ntTSL 2 BASIC27.24■■□□□ 1.95
RAPGEF3O95398 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF3O95398 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC27.24■■□□□ 1.95
RAPGEF3O95398 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC27.24■■□□□ 1.95
RAPGEF3O95398 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF3O95398 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAPGEF3O95398 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC27.24■■□□□ 1.95
RAPGEF3O95398 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC27.24■■□□□ 1.95
RAPGEF3O95398 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF3O95398 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF3O95398 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC27.23■■□□□ 1.95
RAPGEF3O95398 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC27.23■■□□□ 1.95
RAPGEF3O95398 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF3O95398 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC27.23■■□□□ 1.95
RAPGEF3O95398 VN2R19P-201ENST00000442399 1052 ntBASIC27.23■■□□□ 1.95
RAPGEF3O95398 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF3O95398 AC112698.1-201ENST00000510299 916 ntBASIC27.23■■□□□ 1.95
RAPGEF3O95398 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC27.23■■□□□ 1.95
RAPGEF3O95398 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF3O95398 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF3O95398 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAPGEF3O95398 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
RAPGEF3O95398 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF3O95398 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF3O95398 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF3O95398 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF3O95398 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF3O95398 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC27.22■■□□□ 1.95
RAPGEF3O95398 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms