Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.77■■□□□ 1.08
MBD4O95243 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MBD4O95243 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MBD4O95243 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.77■■□□□ 1.08
MBD4O95243 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MBD4O95243 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MBD4O95243 DRAXINP1-201ENST00000437611 948 ntBASIC21.77■■□□□ 1.08
MBD4O95243 RN7SL606P-201ENST00000472779 293 ntBASIC21.77■■□□□ 1.08
MBD4O95243 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.77■■□□□ 1.08
MBD4O95243 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MBD4O95243 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.77■■□□□ 1.08
MBD4O95243 LINC00167-201ENST00000530583 1419 ntBASIC21.77■■□□□ 1.08
MBD4O95243 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MBD4O95243 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MBD4O95243 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MBD4O95243 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MBD4O95243 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.77■■□□□ 1.08
MBD4O95243 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
MBD4O95243 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
MBD4O95243 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
MBD4O95243 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
MBD4O95243 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MBD4O95243 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MBD4O95243 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.76■■□□□ 1.07
MBD4O95243 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MBD4O95243 LINC00265-3P-201ENST00000447588 903 ntBASIC21.76■■□□□ 1.07
MBD4O95243 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.76■■□□□ 1.07
MBD4O95243 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.76■■□□□ 1.07
MBD4O95243 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.76■■□□□ 1.07
MBD4O95243 CLEC4GP1-201ENST00000596555 870 ntBASIC21.76■■□□□ 1.07
MBD4O95243 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
MBD4O95243 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 AC124864.1-201ENST00000623408 392 ntBASIC21.76■■□□□ 1.07
MBD4O95243 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MBD4O95243 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.76■■□□□ 1.07
MBD4O95243 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.76■■□□□ 1.07
MBD4O95243 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD4O95243 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.75■■□□□ 1.07
MBD4O95243 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD4O95243 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MBD4O95243 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD4O95243 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
MBD4O95243 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
MBD4O95243 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD4O95243 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD4O95243 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.75■■□□□ 1.07
MBD4O95243 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.75■■□□□ 1.07
MBD4O95243 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
MBD4O95243 TOB2P1-201ENST00000469761 992 ntBASIC21.75■■□□□ 1.07
MBD4O95243 GUSBP12-201ENST00000513727 720 ntBASIC21.75■■□□□ 1.07
MBD4O95243 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD4O95243 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.75■■□□□ 1.07
MBD4O95243 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.75■■□□□ 1.07
MBD4O95243 AC012313.10-201ENST00000623509 926 ntBASIC21.75■■□□□ 1.07
MBD4O95243 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.75■■□□□ 1.07
MBD4O95243 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD4O95243 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD4O95243 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
MBD4O95243 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD4O95243 AC104581.1-202ENST00000635932 2618 ntBASIC21.75■■□□□ 1.07
MBD4O95243 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MBD4O95243 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD4O95243 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.74■■□□□ 1.07
MBD4O95243 PHGDH-209ENST00000641074 1780 ntBASIC21.74■■□□□ 1.07
MBD4O95243 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
MBD4O95243 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.74■■□□□ 1.07
MBD4O95243 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.74■■□□□ 1.07
MBD4O95243 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.74■■□□□ 1.07
MBD4O95243 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
MBD4O95243 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.74■■□□□ 1.07
MBD4O95243 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.74■■□□□ 1.07
MBD4O95243 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.74■■□□□ 1.07
MBD4O95243 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.74■■□□□ 1.07
MBD4O95243 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
MBD4O95243 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.74■■□□□ 1.07
MBD4O95243 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD4O95243 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MBD4O95243 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms