Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CNOT3O75175 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CNOT3O75175 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CNOT3O75175 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CNOT3O75175 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.74■□□□□ 0.43
CNOT3O75175 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.74■□□□□ 0.43
CNOT3O75175 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.74■□□□□ 0.43
CNOT3O75175 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 AC099398.1-201ENST00000567919 2776 ntBASIC17.74■□□□□ 0.43
CNOT3O75175 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CNOT3O75175 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.74■□□□□ 0.43
CNOT3O75175 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.74■□□□□ 0.43
CNOT3O75175 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT3O75175 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CNOT3O75175 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CNOT3O75175 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 KRT8P3-201ENST00000519669 1449 ntBASIC17.73■□□□□ 0.43
CNOT3O75175 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CNOT3O75175 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CNOT3O75175 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.73■□□□□ 0.43
CNOT3O75175 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.73■□□□□ 0.43
CNOT3O75175 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CNOT3O75175 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
CNOT3O75175 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CNOT3O75175 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.73■□□□□ 0.43
CNOT3O75175 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 AC036111.1-201ENST00000533973 1582 ntBASIC17.73■□□□□ 0.43
CNOT3O75175 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.73■□□□□ 0.43
CNOT3O75175 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CNOT3O75175 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT3O75175 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT3O75175 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.72■□□□□ 0.43
CNOT3O75175 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT3O75175 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.72■□□□□ 0.43
CNOT3O75175 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.72■□□□□ 0.43
CNOT3O75175 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.72■□□□□ 0.43
CNOT3O75175 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CNOT3O75175 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CNOT3O75175 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.72■□□□□ 0.43
CNOT3O75175 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.72■□□□□ 0.43
CNOT3O75175 FAM86EP-206ENST00000510506 987 ntBASIC17.72■□□□□ 0.43
CNOT3O75175 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.72■□□□□ 0.43
CNOT3O75175 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.72■□□□□ 0.43
CNOT3O75175 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT3O75175 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.72■□□□□ 0.43
CNOT3O75175 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT3O75175 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.72■□□□□ 0.43
CNOT3O75175 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CNOT3O75175 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CNOT3O75175 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT3O75175 AL139384.1-201ENST00000612143 3047 ntBASIC17.72■□□□□ 0.43
CNOT3O75175 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT3O75175 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT3O75175 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CNOT3O75175 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT3O75175 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT3O75175 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT3O75175 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT3O75175 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT3O75175 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT3O75175 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms