Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.53■□□□□ 0.56
PRAMEF11O60813 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEF11O60813 AC116407.4-201ENST00000623319 1061 ntBASIC18.53■□□□□ 0.56
PRAMEF11O60813 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF11O60813 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF11O60813 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF11O60813 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF11O60813 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF11O60813 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEF11O60813 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF11O60813 AC093010.1-201ENST00000473625 1624 ntBASIC18.52■□□□□ 0.56
PRAMEF11O60813 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF11O60813 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF11O60813 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF11O60813 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.52■□□□□ 0.56
PRAMEF11O60813 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF11O60813 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF11O60813 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF11O60813 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF11O60813 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF11O60813 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF11O60813 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 AC005332.3-201ENST00000589904 676 ntBASIC18.52■□□□□ 0.56
PRAMEF11O60813 GPR32P1-201ENST00000601788 811 ntBASIC18.52■□□□□ 0.56
PRAMEF11O60813 AL390719.2-201ENST00000606993 987 ntBASIC18.52■□□□□ 0.56
PRAMEF11O60813 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEF11O60813 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
PRAMEF11O60813 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PRAMEF11O60813 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.52■□□□□ 0.55
PRAMEF11O60813 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEF11O60813 AL096828.2-201ENST00000567259 1965 ntBASIC18.51■□□□□ 0.55
PRAMEF11O60813 AC135050.7-201ENST00000624508 2218 ntBASIC18.51■□□□□ 0.55
PRAMEF11O60813 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF11O60813 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF11O60813 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF11O60813 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF11O60813 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF11O60813 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF11O60813 LINC00167-201ENST00000530583 1419 ntBASIC18.51■□□□□ 0.55
PRAMEF11O60813 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PRAMEF11O60813 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PRAMEF11O60813 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF11O60813 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.51■□□□□ 0.55
PRAMEF11O60813 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF11O60813 AC011498.5-201ENST00000592027 486 ntBASIC18.51■□□□□ 0.55
PRAMEF11O60813 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF11O60813 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PRAMEF11O60813 AC004263.2-201ENST00000617183 678 ntBASIC18.51■□□□□ 0.55
PRAMEF11O60813 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.51■□□□□ 0.55
PRAMEF11O60813 AL358472.4-201ENST00000633140 710 ntBASIC18.51■□□□□ 0.55
PRAMEF11O60813 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PRAMEF11O60813 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF11O60813 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF11O60813 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF11O60813 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF11O60813 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF11O60813 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 Z83836.1-201ENST00000624605 1642 ntBASIC18.5■□□□□ 0.55
PRAMEF11O60813 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF11O60813 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF11O60813 AP000550.4-202ENST00000639755 178 ntBASIC18.5■□□□□ 0.55
PRAMEF11O60813 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms