Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ZIC3O60481 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.42■□□□□ 0.22
ZIC3O60481 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ZIC3O60481 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ZIC3O60481 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.42■□□□□ 0.22
ZIC3O60481 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.42■□□□□ 0.22
ZIC3O60481 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ZIC3O60481 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.42■□□□□ 0.22
ZIC3O60481 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.42■□□□□ 0.22
ZIC3O60481 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.42■□□□□ 0.22
ZIC3O60481 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.42■□□□□ 0.22
ZIC3O60481 RN7SL606P-201ENST00000472779 293 ntBASIC16.42■□□□□ 0.22
ZIC3O60481 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.42■□□□□ 0.22
ZIC3O60481 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.42■□□□□ 0.22
ZIC3O60481 MIR3180-1-201ENST00000580374 94 ntBASIC16.42■□□□□ 0.22
ZIC3O60481 AC090616.6-201ENST00000582640 721 ntBASIC16.42■□□□□ 0.22
ZIC3O60481 MIR3180-3-201ENST00000584616 94 ntBASIC16.42■□□□□ 0.22
ZIC3O60481 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.42■□□□□ 0.22
ZIC3O60481 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 AC009113.1-201ENST00000570267 2443 ntBASIC16.42■□□□□ 0.22
ZIC3O60481 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.42■□□□□ 0.22
ZIC3O60481 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.42■□□□□ 0.22
ZIC3O60481 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 LINC00602-201ENST00000629776 2065 ntBASIC16.42■□□□□ 0.22
ZIC3O60481 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ZIC3O60481 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ZIC3O60481 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZIC3O60481 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.41■□□□□ 0.22
ZIC3O60481 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.41■□□□□ 0.22
ZIC3O60481 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ZIC3O60481 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.41■□□□□ 0.22
ZIC3O60481 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.41■□□□□ 0.22
ZIC3O60481 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.41■□□□□ 0.22
ZIC3O60481 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.41■□□□□ 0.22
ZIC3O60481 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.41■□□□□ 0.22
ZIC3O60481 IGHV3-41-201ENST00000613121 348 ntBASIC16.41■□□□□ 0.22
ZIC3O60481 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 LINC00167-201ENST00000530583 1419 ntBASIC16.41■□□□□ 0.22
ZIC3O60481 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ZIC3O60481 AC093677.2-201ENST00000600169 1863 ntBASIC16.41■□□□□ 0.22
ZIC3O60481 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.41■□□□□ 0.22
ZIC3O60481 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ZIC3O60481 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ZIC3O60481 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZIC3O60481 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.4■□□□□ 0.22
ZIC3O60481 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
ZIC3O60481 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ZIC3O60481 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ZIC3O60481 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
ZIC3O60481 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ZIC3O60481 AP002414.4-201ENST00000589764 1148 ntBASIC16.4■□□□□ 0.22
ZIC3O60481 AC092119.3-201ENST00000612618 583 ntBASIC16.4■□□□□ 0.22
ZIC3O60481 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.4■□□□□ 0.22
ZIC3O60481 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.4■□□□□ 0.22
ZIC3O60481 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
ZIC3O60481 AC135776.1-201ENST00000319817 2481 ntBASIC16.4■□□□□ 0.22
ZIC3O60481 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZIC3O60481 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.4■□□□□ 0.22
ZIC3O60481 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ZIC3O60481 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ZIC3O60481 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms