Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.94□□□□□ -0.02
SSSCA1O60232 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SSSCA1O60232 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SSSCA1O60232 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SSSCA1O60232 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.94□□□□□ -0.02
SSSCA1O60232 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.94□□□□□ -0.02
SSSCA1O60232 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SSSCA1O60232 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SSSCA1O60232 KRT8P3-201ENST00000519669 1449 ntBASIC14.93□□□□□ -0.02
SSSCA1O60232 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SSSCA1O60232 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SSSCA1O60232 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SSSCA1O60232 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.93□□□□□ -0.02
SSSCA1O60232 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SSSCA1O60232 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.93□□□□□ -0.02
SSSCA1O60232 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.93□□□□□ -0.02
SSSCA1O60232 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.93□□□□□ -0.02
SSSCA1O60232 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.93□□□□□ -0.02
SSSCA1O60232 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.93□□□□□ -0.02
SSSCA1O60232 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.93□□□□□ -0.02
SSSCA1O60232 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.93□□□□□ -0.02
SSSCA1O60232 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SSSCA1O60232 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.93□□□□□ -0.02
SSSCA1O60232 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.93□□□□□ -0.02
SSSCA1O60232 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SSSCA1O60232 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SSSCA1O60232 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.93□□□□□ -0.02
SSSCA1O60232 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.93□□□□□ -0.02
SSSCA1O60232 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.93□□□□□ -0.02
SSSCA1O60232 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.93□□□□□ -0.02
SSSCA1O60232 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.93□□□□□ -0.02
SSSCA1O60232 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SSSCA1O60232 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSSCA1O60232 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.92□□□□□ -0.02
SSSCA1O60232 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.92□□□□□ -0.02
SSSCA1O60232 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.92□□□□□ -0.02
SSSCA1O60232 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.92□□□□□ -0.02
SSSCA1O60232 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
SSSCA1O60232 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
SSSCA1O60232 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.92□□□□□ -0.02
SSSCA1O60232 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SSSCA1O60232 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.92□□□□□ -0.02
SSSCA1O60232 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.92□□□□□ -0.02
SSSCA1O60232 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 AC060766.5-201ENST00000590539 871 ntBASIC14.92□□□□□ -0.02
SSSCA1O60232 AL121832.2-201ENST00000610979 668 ntBASIC14.92□□□□□ -0.02
SSSCA1O60232 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.92□□□□□ -0.02
SSSCA1O60232 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.92□□□□□ -0.02
SSSCA1O60232 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.92□□□□□ -0.02
SSSCA1O60232 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSSCA1O60232 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SSSCA1O60232 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SSSCA1O60232 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SSSCA1O60232 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.91□□□□□ -0.02
SSSCA1O60232 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSSCA1O60232 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms