Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.19□□□□□ -0.14
PDE6DO43924 AC005181.1-201ENST00000604782 1256 ntBASIC14.19□□□□□ -0.14
PDE6DO43924 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.19□□□□□ -0.14
PDE6DO43924 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.19□□□□□ -0.14
PDE6DO43924 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.19□□□□□ -0.14
PDE6DO43924 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.19□□□□□ -0.14
PDE6DO43924 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
PDE6DO43924 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PDE6DO43924 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PDE6DO43924 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.19□□□□□ -0.14
PDE6DO43924 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
PDE6DO43924 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDE6DO43924 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.19□□□□□ -0.14
PDE6DO43924 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDE6DO43924 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
PDE6DO43924 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.18□□□□□ -0.14
PDE6DO43924 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PDE6DO43924 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.18□□□□□ -0.14
PDE6DO43924 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.18□□□□□ -0.14
PDE6DO43924 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 AL160286.2-201ENST00000567150 934 ntBASIC14.18□□□□□ -0.14
PDE6DO43924 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.18□□□□□ -0.14
PDE6DO43924 KRT18P61-201ENST00000585825 1298 ntBASIC14.18□□□□□ -0.14
PDE6DO43924 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
PDE6DO43924 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.18□□□□□ -0.14
PDE6DO43924 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDE6DO43924 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.18□□□□□ -0.14
PDE6DO43924 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
PDE6DO43924 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PDE6DO43924 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PDE6DO43924 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.17□□□□□ -0.14
PDE6DO43924 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.17□□□□□ -0.14
PDE6DO43924 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 KRT18P55-202ENST00000578578 1546 ntBASIC14.17□□□□□ -0.14
PDE6DO43924 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.17□□□□□ -0.14
PDE6DO43924 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PDE6DO43924 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.17□□□□□ -0.14
PDE6DO43924 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.17□□□□□ -0.14
PDE6DO43924 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
PDE6DO43924 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDE6DO43924 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms